RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 MOSPD3O75425 235 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 PAPSS2O95340 614 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 CYP11A1P05108 521 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 DLATP10515 647 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 ODC1P11926 461 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 PSMC3P17980 439 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 NR2F2P24468 414 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 PMLP29590 882 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 POLR2BP30876 1174 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 CASP4P49662 377 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 CLDN10P78369 228 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 SRSF5Q13243 272 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 ADAM9Q13443 819 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 SIM2Q14190 667 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 CTXN3Q4LDR2 81 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 ZNF280DQ6N043 979 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 USP37Q86T82 979 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 TCEAL8Q8IYN2 117 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 CORO1BQ9BR76 489 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 SIX4Q9UIU6 781 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 FBXL5Q9UKA1 691 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 DSEQ9UL01 958 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 R3HCC1Q9Y3T6 440 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 TIMM13Q9Y5L4 95 aaPredicted RBP16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 NCANO14594 1321 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 PTPRJQ12913 1337 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 CHURC1-FNTBB4DL54 471 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 K7ESF4 209 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 CYB561D2O14569 222 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 TM4SF5O14894 197 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 SEC24AO95486 1093 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 LRG1P02750 347 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 KRT19P08727 400 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 ATF2P15336 505 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 GDI1P31150 447 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 CNR2P34972 360 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 FNTBP49356 437 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 AP3M2P53677 418 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 MLLT6P55198 1093 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 ENPEPQ07075 957 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 STIM1Q13586 685 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 MORC3Q14149 939 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 WDR44Q5JSH3 913 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 SCARA3Q6AZY7 606 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 ISM2Q6H9L7 571 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 TRAPPC11Q7Z392 1133 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 SPEM1Q8N4L4 309 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 PLEKHO2Q8TD55 490 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 TMC2Q8TDI7 906 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 ZNF516Q92618 1163 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 SMARCD2Q92925 531 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 DHTKD1Q96HY7 919 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 KIAA1468Q9P260 1216 aa16.87■□□□□ 0.29
CHMP1A-206ENST00000549139 ZNF197O14709 1029 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 VIPR2P41587 438 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 MCCD1P59942 119 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 MYO1EQ12965 1108 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 CAMK4Q16566 473 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 TPGS2Q68CL5 300 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 OVOS1Q6IE37 1185 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 METTL23Q86XA0 190 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 TRIML1Q8N9V2 468 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 DEPDC1BQ8WUY9 529 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 FAM84AQ96KN4 292 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 TSG101Q99816 390 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 MKNK1Q9BUB5 465 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 TRPV4Q9HBA0 871 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 GDAP2Q9NXN4 497 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 ANGPTL2Q9UKU9 493 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 PKD1L2Q7Z442 2459 aa16.86■□□□□ 0.29
CHMP1A-206ENST00000549139 OR6C75A6NL08 312 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 LRRIQ3A6PVS8 624 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 GOLGA6L22H0YM25 854 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 PSMA7O14818 248 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 IKBKBO14920 756 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 CETN3O15182 167 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 FOXD2O60548 495 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 AKAP3O75969 853 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 CST3P01034 146 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 C4BPAP04003 597 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 BMP6P22004 513 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 CCNE1P24864 410 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 ELF1P32519 619 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 LIMK1P53667 647 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 EPHA5P54756 1037 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 SHC2P98077 582 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 FKBP3Q00688 224 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 N4BP2L1Q5TBK1 243 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 ANKRD40Q6AI12 368 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 INTS8Q75QN2 995 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 DPH6Q7L8W6 267 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 LONP2Q86WA8 852 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 DDX1Q92499 740 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 C2orf42Q9NWW7 574 aa16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 RALYQ9UKM9 306 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-206ENST00000549139 MAFFQ9ULX9 164 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms