RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 PMM2O15305 246 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 RBP3P10745 1247 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 PYGBP11216 843 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 ALADP13716 330 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 CCNB1P14635 433 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 ELK3P41970 407 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 ARL4CP56559 192 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 SNRPFP62306 86 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 CXCL9Q07325 125 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 FAAP100Q0VG06 881 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 BMPR2Q13873 1038 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 EURLQ9NYK6 297 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 RABGEF1Q9UJ41 708 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 H7C0C1 242 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 GYG2O15488 501 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 TCEA3O75764 348 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 KRT36O76013 467 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 ATP4AP20648 1035 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 CALB2P22676 271 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 CDKN2BP42772 138 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 ATP5OP48047 213 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 PTDSS1P48651 473 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 ARFIP2P53365 341 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 YARSP54577 528 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 EIF3EP60228 445 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 DARS2Q6PI48 645 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 PHF13Q86YI8 300 aaPredicted RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 KIAA0319LQ8IZA0 1049 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 NETO2Q8NC67 525 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 UBA3Q8TBC4 463 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 TTC25Q96NG3 672 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 TIPINQ9BVW5 301 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 MANSC1Q9H8J5 431 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 ZNF302Q9NR11 478 aa12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 SMG5Q9UPR3 1016 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-206ENST00000549049 FAM237BA0A1B0GVD1 139 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 E2F8A0AVK6 867 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 HAUS5O94927 633 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 STBD1O95210 358 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 KPNB1Q14974 876 aaKnown RBP12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 MORF4L2Q15014 288 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 RCN1Q15293 331 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 KBTBD12Q3ZCT8 623 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 PDIK1LQ8N165 341 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 AGGF1Q8N302 714 aaeCLIP12.98□□□□□ -0.333e-8■□□□□ 9.6
SLC38A1-206ENST00000549049 WDTC1Q8N5D0 677 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 STK32AQ8WU08 396 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 NLRP4Q96MN2 994 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 MIPEPQ99797 713 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 TSSK1BQ9BXA7 367 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 IQCGQ9H095 443 aaKnown RBP12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 PIH1D1Q9NWS0 290 aaKnown RBP12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 INHBAP08476 426 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 TPBGLP0DKB5 382 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 PTK7Q13308 1070 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 PTPN20Q4JDL3 420 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 CLNKQ7Z7G1 428 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 NIM1KQ8IY84 436 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 ATP11CQ8NB49 1132 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 SPATA18Q8TC71 538 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 TRAPPC12Q8WVT3 735 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 CYTH2Q99418 400 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 LRMDAQ9H2I8 198 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 CYP39A1Q9NYL5 469 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
SLC38A1-206ENST00000549049 INO80B-WBP1J3KQ70 363 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 TYROBPO43914 113 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 ZC3H11AO75152 810 aaKnown RBP eCLIP12.97□□□□□ -0.335e-6■□□□□ 9.7
SLC38A1-206ENST00000549049 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 TUBP50607 506 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 KDSRQ06136 332 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 OASLQ15646 514 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 PRPF31Q8WWY3 499 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 SERAC1Q96JX3 654 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 WDR83Q9BRX9 315 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 TRIM55Q9BYV6 548 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 INO80BQ9C086 356 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 CYB561D2O14569 222 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 KIF1CO43896 1103 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 TOP3BO95985 862 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 ENO1P06733 434 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 ESRRAP11474 423 aaPredicted RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 PHBP35232 272 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 RASSF2P50749 326 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 ALYREFQ86V81 257 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 RNF149Q8NC42 400 aa12.97□□□□□ -0.33
SLC38A1-206ENST00000549049 CGRRF1Q99675 332 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms