RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 PAPLNO95428 1278 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 SEC24AO95486 1093 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 VNN1O95497 513 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 ASS1P00966 412 aaKnown RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 FAM163BP0C2L3 166 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 FSHRP23945 695 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 GNL1P36915 607 aaPredicted RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 TUFMP49411 452 aaKnown RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 PPP3CAQ08209 521 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 VAC14Q08AM6 782 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 CETN1Q12798 172 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 DUSP4Q13115 394 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 TAF12Q16514 161 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 DPCR1Q3MIW9 517 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 PABPC1LQ4VXU2 614 aaKnown RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 WDR44Q5JSH3 913 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 C1orf220Q5T0J3 134 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 SCARA3Q6AZY7 606 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 C4orf50Q6ZRC1 276 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 GRASPQ7Z6J2 395 aaPredicted RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 ITIH5Q86UX2 942 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 LAPTM4BQ86VI4 370 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 OSTM1Q86WC4 334 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 CREBRFQ8IUR6 639 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 SPATA2LQ8IUW3 424 aaPredicted RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 FAM114A1Q8IWE2 563 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 ATAD1Q8NBU5 361 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 TAS1R2Q8TE23 839 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 LRRN4Q8WUT4 740 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 ZNF512Q96ME7 567 aaPredicted RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 HS3ST6Q96QI5 342 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 DUSP9Q99956 384 aaKnown RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 RTP3Q9BQQ7 232 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
SP1-203ENST00000548560 SMYD3Q9H7B4 428 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 HSFX1Q9UBD0 423 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 USTQ9Y2C2 406 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 ATP8B3O60423 1300 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 PATJQ8NI35 1801 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 LOC730098B7Z3J9 87 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 RHOP08100 348 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 PDGFRBP09619 1106 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 PTPN2P17706 415 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 FMO5P49326 533 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 PSMC1P62191 440 aaKnown RBP9.29□□□□□ -0.92
SP1-203ENST00000548560 CYP27A1Q02318 531 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 STX1AQ16623 288 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 CT47A1Q5JQC4 288 aaPredicted RBP9.29□□□□□ -0.92
SP1-203ENST00000548560 CYP4A22Q5TCH4 519 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 SPOPLQ6IQ16 392 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 PDZD4Q76G19 769 aaPredicted RBP9.29□□□□□ -0.92
SP1-203ENST00000548560 LEMD2Q8NC56 503 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 KBTBD7Q8WVZ9 684 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 SLC35C1Q96A29 364 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 PBXIP1Q96AQ6 731 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 FUBP3Q96I24 572 aaKnown RBP eCLIP9.29□□□□□ -0.92
SP1-203ENST00000548560 TNIP3Q96KP6 325 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 CNOT6LQ96LI5 555 aaKnown RBP9.29□□□□□ -0.92
SP1-203ENST00000548560 GCNAQ96QF7 691 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 MRPL45Q9BRJ2 306 aaKnown RBP9.29□□□□□ -0.92
SP1-203ENST00000548560 PI4K2AQ9BTU6 479 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 NIF3L1Q9GZT8 377 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 ABCB6Q9NP58 842 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
SP1-203ENST00000548560 ASAH2Q9NR71 780 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 RAB20Q9NX57 234 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.29□□□□□ -0.92
SP1-203ENST00000548560 MAGEC2Q9UBF1 373 aaPredicted RBP9.29□□□□□ -0.92
SP1-203ENST00000548560 GTF3C4Q9UKN8 822 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 SLC27A5Q9Y2P5 690 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.29□□□□□ -0.92
SP1-203ENST00000548560 ANAPC1Q9H1A4 1944 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 NCOR1O75376 2440 aa9.29□□□□□ -0.92
SP1-203ENST00000548560 C2CD4DB7Z1M9 353 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 ZNF197O14709 1029 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 HCRTO43612 131 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 VNN2O95498 520 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 RFX1P22670 979 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 LMO2P25791 158 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 ANXA13P27216 316 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 ERCC5P28715 1186 aaPredicted RBP9.28□□□□□ -0.92
SP1-203ENST00000548560 MTIF2P46199 727 aaKnown RBP9.28□□□□□ -0.92
SP1-203ENST00000548560 CDR1P51861 262 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SP1-203ENST00000548560 YWHAEP62258 255 aaKnown RBP9.28□□□□□ -0.92
SP1-203ENST00000548560 RPL10AP62906 217 aaKnown RBP9.28□□□□□ -0.92
SP1-203ENST00000548560 NTHL1P78549 312 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 CBWD6Q4V339 395 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 MDH1BQ5I0G3 518 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 CBWD3Q5JTY5 395 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 CBWD5Q5RIA9 395 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
SP1-203ENST00000548560 RBM43Q6ZSC3 357 aaKnown RBP9.28□□□□□ -0.92
SP1-203ENST00000548560 LIMS2Q7Z4I7 341 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 LRRTM3Q86VH5 581 aa9.28□□□□□ -0.92
SP1-203ENST00000548560 TTC39CQ8N584 583 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms