RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 METTL7BQ6UX53 244 aa16.91■□□□□ 0.3
CNOT2-209ENST00000548159 NIPA2Q8N8Q9 360 aa16.91■□□□□ 0.3
CNOT2-209ENST00000548159 KLHL29Q96CT2 875 aa16.91■□□□□ 0.3
CNOT2-209ENST00000548159 ZNF518BQ9C0D4 1074 aa16.91■□□□□ 0.3
CNOT2-209ENST00000548159 SDCBP2Q9H190 292 aa16.91■□□□□ 0.3
CNOT2-209ENST00000548159 PCDH9Q9HC56 1237 aa16.91■□□□□ 0.3
CNOT2-209ENST00000548159 KLHL14Q9P2G3 628 aa16.91■□□□□ 0.3
CNOT2-209ENST00000548159 FARP1Q9Y4F1 1045 aaPredicted RBP16.91■□□□□ 0.3
CNOT2-209ENST00000548159 INO80B-WBP1J3KQ70 363 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 CXCL8P10145 99 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 PSMC1P62191 440 aaKnown RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 VGLL4Q14135 290 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 TFDP1Q14186 410 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 CENPUQ71F23 418 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 CCDC91Q7Z6B0 441 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 RIBC1Q8N443 379 aaPredicted RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 CPT1BQ92523 772 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 TTC25Q96NG3 672 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 INO80BQ9C086 356 aaPredicted RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 C12orf65Q9H3J6 166 aaKnown RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 DDX56Q9NY93 547 aaKnown RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 POLR2AP24928 1970 aaKnown RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 CA4P22748 312 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 PTPN7P35236 360 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 GSCP56915 257 aaPredicted RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 GRM1Q13255 1194 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 HIF1AQ16665 826 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 RAB6CQ53S08 254 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 SYCP2LQ5T4T6 812 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 TDRPQ86YL5 185 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 UNC45BQ8IWX7 931 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 SLC16A10Q8TF71 515 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 RAB6CQ9H0N0 254 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 PTPRHQ9HD43 1115 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 METTL5Q9NRN9 209 aaKnown RBP16.9■□□□□ 0.3
CNOT2-209ENST00000548159 SIX4Q9UIU6 781 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 STK38LQ9Y2H1 464 aa16.9■□□□□ 0.3
CNOT2-209ENST00000548159 CFAP73A6NFT4 308 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 SIGLEC16A6NMB1 481 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 ERBB2P04626 1255 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 KDELR1P24390 212 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 RPL22P35268 128 aaKnown RBP16.89■□□□□ 0.29
CNOT2-209ENST00000548159 ZNF268Q14587 947 aaPredicted RBP16.89■□□□□ 0.29
CNOT2-209ENST00000548159 ACCSLQ4AC99 568 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 SH3D19Q5HYK7 790 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 COPS5Q92905 334 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 GPR20Q99678 358 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 SPATC1LQ9H0A9 340 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 PHTF1Q9UMS5 762 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 SHOC2Q9UQ13 582 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 CEP83Q9Y592 693 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 PIK3R2O00459 728 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 RAD23BP54727 409 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 SH3PXD2AQ5TCZ1 1133 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 ATF7IP2Q5U623 682 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 RIOX2Q8IUF8 465 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 ZBTB8OSQ8IWT0 167 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 SMC6Q96SB8 1091 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 PPP1R16BQ96T49 567 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 RABGEF1Q9UJ41 708 aa16.89■□□□□ 0.29
CNOT2-209ENST00000548159 TYROBPO43914 113 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 NFICP08651 508 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 KRT4P19013 534 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 PROZP22891 400 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 MAP2K2P36507 400 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 CLCN3P51790 818 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 TAP1Q03518 808 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 RNF43Q68DV7 783 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 MPZL3Q6UWV2 235 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 DPH6Q7L8W6 267 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 XYLT1Q86Y38 959 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 MAGEC3Q8TD91 643 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 SMYD3Q9H7B4 428 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 IGKV6-21A0A0C4DH24 114 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 GOLGA8RI6L899 631 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 SOCS7O14512 581 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 PRPF4O43172 522 aaKnown RBP eCLIP16.88■□□□□ 0.299e-8■■■■■ 28.2
CNOT2-209ENST00000548159 TMEM63AO94886 807 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
CNOT2-209ENST00000548159 SPARCL1Q14515 664 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 MXD4Q14582 209 aaPredicted RBP16.88■□□□□ 0.29
CNOT2-209ENST00000548159 TSHZ1Q6ZSZ6 1077 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 CEP128Q6ZU80 1094 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 C3orf62Q6ZUJ4 267 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 ASRGL1Q7L266 308 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 POLNQ7Z5Q5 900 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 GBP7Q8N8V2 638 aaPredicted RBP16.88■□□□□ 0.29
CNOT2-209ENST00000548159 GPATCH11Q8N954 259 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 NAT8LQ8N9F0 302 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 C1orf127Q8N9H9 656 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 FAM71DQ8N9W8 422 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 AGAP11Q8TF27 550 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 PYROXD1Q8WU10 500 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 HSPH1Q92598 858 aa16.88■□□□□ 0.29
CNOT2-209ENST00000548159 KLF6Q99612 283 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms