RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 H2AFVQ71UI9 128 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 GET4Q7L5D6 327 aaPredicted RBP10.43□□□□□ -0.74
CDK4-205ENST00000547853 SLFN11Q7Z7L1 901 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 HOOK3Q86VS8 718 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 NLRP14Q86W24 1093 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 GPBP1Q86WP2 473 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 IFT81Q8WYA0 676 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 RSPH1Q8WYR4 309 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 FAM20AQ96MK3 541 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 MKNK1Q9BUB5 465 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDK4-205ENST00000547853 BCO2Q9BYV7 579 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 KCNMB3Q9NPA1 279 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 NLRC4Q9NPP4 1024 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDK4-205ENST00000547853 GEMIN8Q9NWZ8 242 aaKnown RBP10.43□□□□□ -0.74
CDK4-205ENST00000547853 SALL4Q9UJQ4 1053 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 NENFQ9UMX5 172 aa10.43□□□□□ -0.74
CDK4-205ENST00000547853 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
CDK4-205ENST00000547853 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.43□□□□□ -0.74
CDK4-205ENST00000547853 NCANO14594 1321 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 A0A087X0T9 212 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 CCDC195A0A1B0GUA6 201 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 CARNS1A5YM72 827 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 FAM187AA6NFU0 413 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 SPDYE3A6NKU9 549 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 MEIS3P2A8K0S8 358 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 KCNK3O14649 394 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 BACH1O14867 736 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 EIF3DO15371 548 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDK4-205ENST00000547853 RAD51CO43502 376 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 FTCDO95954 541 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 SSBP05455 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDK4-205ENST00000547853 FAM228BP0C875 321 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 TDGF1P13385 188 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 LAMP2P13473 410 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 UCHL3P15374 230 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 FGFR4P22455 802 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 NR2F2P24468 414 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 KLRC2P26717 231 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 NLRP11P59045 1033 aaKnown RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 SHC2P98077 582 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 IFFO1Q0D2I5 559 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 SPEM2Q0P670 501 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 HLTFQ14527 1009 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDK4-205ENST00000547853 MLF2Q15773 248 aaPredicted RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 KNOP1Q1ED39 458 aaKnown RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 CEP85LQ5SZL2 805 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 FAM160B1Q5W0V3 765 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 ALKBH5Q6P6C2 394 aaKnown RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 METTL13Q8N6R0 699 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 LRRC57Q8N9N7 239 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 ST13P5Q8NFI4 369 aaPredicted RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 MYCBPAPQ8TBZ2 947 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 ZNF473Q8WTR7 871 aaKnown RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 SCFD1Q8WVM8 642 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 PIK3R5Q8WYR1 880 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 SMG7Q92540 1137 aaKnown RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 HAS1Q92839 578 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 LPPQ93052 612 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 HPS3Q969F9 1004 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 CENPTQ96BT3 561 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 MXRA8Q9BRK3 442 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 STMN4Q9H169 189 aaPredicted RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 PSTPIP2Q9H939 334 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 ZNF302Q9NR11 478 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 ADAMTS1Q9UHI8 967 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 NAGPAQ9UK23 515 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 GMEB2Q9UKD1 530 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 ANGPTL2Q9UKU9 493 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 DNM3Q9UQ16 869 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 PLAAQ9Y263 795 aa10.42□□□□□ -0.74
CDK4-205ENST00000547853 UTP11Q9Y3A2 253 aaKnown RBP10.42□□□□□ -0.74
CDK4-205ENST00000547853 MAST4O15021 2626 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 IGSF10Q6WRI0 2623 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 VWA8A3KMH1 1905 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 DMXL2Q8TDJ6 3036 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 GMNCA6NCL1 334 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 C5orf60A6NFR6 353 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 TMCO5BA8MYB1 307 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 DDX39AO00148 427 aaKnown RBP10.41□□□□□ -0.74
CDK4-205ENST00000547853 TEX28O15482 410 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 TBC1D4O60343 1298 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 GLUD1P00367 558 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 KRT14P02533 472 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
CDK4-205ENST00000547853 RPA1P27694 616 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 CTNNA1P35221 906 aaKnown RBP10.41□□□□□ -0.74
CDK4-205ENST00000547853 STAT1P42224 750 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 PHKA2P46019 1235 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 LIG3P49916 1009 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 GPC3P51654 580 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 SMTNP53814 917 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 SLC12A3P55017 1021 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 DHX34Q14147 1143 aaKnown RBP10.41□□□□□ -0.74
CDK4-205ENST00000547853 Q4G0T1 1027 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 TSSK4Q6SA08 328 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 CCDC121Q6ZUS5 278 aa10.41□□□□□ -0.74
CDK4-205ENST00000547853 EPM2AIP1Q7L775 607 aaPredicted RBP10.41□□□□□ -0.74
CDK4-205ENST00000547853 PEX26Q7Z412 305 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms