RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 NAXEQ8NCW5 288 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 PPHLN1Q8NEY8 458 aaKnown RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 NLGN4YQ8NFZ3 816 aaPredicted RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 OR52N2Q8NGI0 321 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 CCHCR1Q8TD31 782 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 NELL1Q92832 810 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 DDX17Q92841 729 aaKnown RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 USP13Q92995 863 aaPredicted RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 SKA1Q96BD8 255 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 COQ10AQ96MF6 247 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 PPM1MQ96MI6 270 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 RMDN3Q96TC7 470 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 CPEB1Q9BZB8 566 aaKnown RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 SENP6Q9GZR1 1112 aaPredicted RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 UNC45AQ9H3U1 944 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 AS3MTQ9HBK9 375 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 TMEM8AQ9HCN3 771 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 AKIP1Q9NQ31 210 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 A1CFQ9NQ94 594 aaKnown RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 SYBUQ9NX95 663 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 MAP3K20Q9NYL2 800 aaKnown RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 TRPM5Q9NZQ8 1165 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 FAM30AQ9NZY2 134 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 CFAP97Q9P2B7 532 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 STAP2Q9UGK3 403 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 AJAP1Q9UKB5 411 aaPredicted RBP2.69□□□□□ -1.98
CPNE8-205ENST00000547417 GPR52Q9Y2T5 361 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 PCDHGB3Q9Y5G1 929 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 PCDHGB2Q9Y5G2 931 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 PCDHA1Q9Y5I3 950 aa2.69□□□□□ -1.98
CPNE8-205ENST00000547417 GAGE12BA1L429 117 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 GAGE12HA6NDE8 117 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 F8W8V4 182 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 INO80B-WBP1J3KQ70 363 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 M0R3H8 397 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 BTN3A1O00481 513 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 EPB41L2O43491 1005 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 NCR1O76036 304 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 NDUFA10O95299 355 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 GNAI3P08754 354 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 HKR1P10072 659 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SRGNP10124 158 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 IDEP14735 1019 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 ALOX15P16050 662 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 PDIA3P30101 505 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 BMPR1AP36894 532 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SERPINF1P36955 418 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 CASRP41180 1078 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 MAPK9P45984 424 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 KCNJ5P48544 419 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 FLT3LGP49771 235 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 GZMKP49863 264 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 GNAI1P63096 354 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 POU6F2P78424 691 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 CREMQ03060 361 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 DUSP2Q05923 314 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SLC13A2Q13183 592 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 MRPL49Q13405 166 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 RAB32Q13637 225 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 PRKG1Q13976 671 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 EFR3AQ14156 821 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SIM2Q14190 667 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 PTK2BQ14289 1009 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 KIF22Q14807 665 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 ERCC6LQ2NKX8 1250 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 PABPC1LQ4VXU2 614 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 FAM47AQ5JRC9 791 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 INTS11Q5TA45 600 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 OTUD7BQ6GQQ9 843 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 FBXO42Q6P3S6 717 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 DOK3Q7L591 496 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 ZNF572Q7Z3I7 529 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 PDSS2Q86YH6 399 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 LIX1LQ8IVB5 337 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 GALNT15Q8N3T1 639 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 ZGPATQ8N5A5 531 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 AOPEPQ8N6M6 819 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 PIK3C3Q8NEB9 887 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 ZNF384Q8TF68 577 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 LINC00476Q8WZB0 136 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 TNPO1Q92973 898 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 CAVIN3Q969G5 261 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 EID2BQ96D98 161 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SNX22Q96L94 193 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 ZSCAN31Q96LW9 406 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 LSM14BQ9BX40 385 aaKnown RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 INO80BQ9C086 356 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SIK2Q9H0K1 926 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 C11orf54Q9H0W9 315 aaPredicted RBP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 MAGEH1Q9H213 219 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 R3HDMLQ9H3Y0 253 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SACM1LQ9NTJ5 587 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 SAGE1Q9NXZ1 904 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 STK32BQ9NY57 414 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 COL20A1Q9P218 1284 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 DKK2Q9UBU2 259 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.68□□□□□ -1.98
CPNE8-205ENST00000547417 CLCA2Q9UQC9 943 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 TMEM98Q9Y2Y6 226 aa2.68□□□□□ -1.98
CPNE8-205ENST00000547417 INSL6Q9Y581 213 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms