RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ZBTB46Q86UZ6 589 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 ZCRB1Q8TBF4 217 aaKnown RBP5.36□□□□□ -1.55
CCDC38-204ENST00000546816 ATRIPQ8WXE1 791 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 BRINP2Q9C0B6 783 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 PRSS22Q9GZN4 317 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 DCLK1O15075 740 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 PDHA1P08559 390 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 CCKBRP32239 447 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 EXOSC9Q06265 439 aaKnown RBP5.35□□□□□ -1.55
CCDC38-204ENST00000546816 LAMB3Q13751 1172 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 ZNF618Q5T7W0 954 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 FAM46DQ8NEK8 389 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 DDX17Q92841 729 aaKnown RBP5.35□□□□□ -1.55
CCDC38-204ENST00000546816 MVB12AQ96EY5 273 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 ADGRE3Q9BY15 652 aa5.35□□□□□ -1.55
CCDC38-204ENST00000546816 SMIM22K7EJ46 135 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 PPM1DO15297 605 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 DNAJB5O75953 348 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 GNAI2P04899 355 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 PIM1P11309 404 aaPredicted RBP5.34□□□□□ -1.55
CCDC38-204ENST00000546816 CD6P30203 668 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 NEK2P51955 445 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 ZNF134P52741 427 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 TEDDM1Q5T9Z0 273 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 EMC10Q5UCC4 262 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 FAM160B1Q5W0V3 765 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 TMEM108Q6UXF1 575 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 CATSPERGQ6ZRH7 1159 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 KRT73Q86Y46 540 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.34□□□□□ -1.55
CCDC38-204ENST00000546816 HPS3Q969F9 1004 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 TMEM79Q9BSE2 394 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 TUBA8Q9NY65 449 aaPredicted RBP5.34□□□□□ -1.55
CCDC38-204ENST00000546816 DLL3Q9NYJ7 618 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 HESX1Q9UBX0 185 aa5.34□□□□□ -1.55
CCDC38-204ENST00000546816 CYP2D7A0A087X1C5 515 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 SMIM35A0A1B0GVV1 85 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 H3BUI4 141 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 ALDH2P05091 517 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 ALDH9A1P49189 494 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 SP2Q02086 613 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 ATAT1Q5SQI0 421 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 ZNF804AQ7Z570 1209 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 WDR53Q7Z5U6 358 aaPredicted RBP5.33□□□□□ -1.56
CCDC38-204ENST00000546816 DTX2Q86UW9 622 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 HOOK2Q96ED9 719 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 SLC35A4Q96G79 324 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 SLC46A1Q96NT5 459 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 NELL2Q99435 816 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 NUP88Q99567 741 aaPredicted RBP5.33□□□□□ -1.56
CCDC38-204ENST00000546816 VPS16Q9H269 839 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 ZNF580Q9UK33 172 aa5.33□□□□□ -1.56
CCDC38-204ENST00000546816 FNDC1Q4ZHG4 1894 aaPredicted RBP5.32□□□□□ -1.56
CCDC38-204ENST00000546816 ABLIM3O94929 683 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 MMP13P45452 471 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 SOX8P57073 446 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 EEFSECP57772 596 aaKnown RBP5.32□□□□□ -1.56
CCDC38-204ENST00000546816 DAZAP2Q15038 168 aaPredicted RBP5.32□□□□□ -1.56
CCDC38-204ENST00000546816 MAVSQ7Z434 540 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 GALNT16Q8N428 558 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 CELF5Q8N6W0 485 aaKnown RBP5.32□□□□□ -1.56
CCDC38-204ENST00000546816 C8orf58Q8NAV2 365 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 PLBD2Q8NHP8 589 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 BRIX1Q8TDN6 353 aaKnown RBP5.32□□□□□ -1.56
CCDC38-204ENST00000546816 HMCESQ96FZ2 354 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 TTYH3Q9C0H2 523 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 SLC12A5Q9H2X9 1139 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 PCDHA6Q9UN73 950 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 ANKRD6Q9Y2G4 727 aa5.32□□□□□ -1.56
CCDC38-204ENST00000546816 NOP58Q9Y2X3 529 aaKnown RBP5.32□□□□□ -1.56
CCDC38-204ENST00000546816 KCNU1A8MYU2 1149 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 INSIG1O15503 277 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 CBSLP0DN79 551 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 PF4V1P10720 104 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 VCAM1P19320 739 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 CBSP35520 551 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 LIPAP38571 399 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 RAPGEF1Q13905 1077 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 ZNF260Q3ZCT1 412 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 RUSC1-AS1Q66K80 236 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 SFRP4Q6FHJ7 346 aaPredicted RBP5.31□□□□□ -1.56
CCDC38-204ENST00000546816 CHSY1Q86X52 802 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 SAMD14Q8IZD0 417 aaPredicted RBP5.31□□□□□ -1.56
CCDC38-204ENST00000546816 CDK5RAP3Q96JB5 506 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 CAMKK2Q96RR4 588 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 CGRRF1Q99675 332 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 AASDHPPTQ9NRN7 309 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 SSX2IPQ9Y2D8 614 aa5.31□□□□□ -1.56
CCDC38-204ENST00000546816 QSOX1O00391 747 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 UNC5CO95185 931 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 CYP2C18P33260 490 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 POLGP54098 1239 aaPredicted RBP5.3□□□□□ -1.56
CCDC38-204ENST00000546816 CYP4F2P78329 520 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 CCDC157Q569K6 752 aa5.3□□□□□ -1.56
CCDC38-204ENST00000546816 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms