RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 TRAPPC11Q7Z392 1133 aa14.37□□□□□ -0.11
RAB5B-203ENST00000546810 C1orf127Q8N9H9 656 aa14.37□□□□□ -0.11
RAB5B-203ENST00000546810 OR5B17Q8NGF7 314 aa14.37□□□□□ -0.11
RAB5B-203ENST00000546810 ING5Q8WYH8 240 aa14.37□□□□□ -0.11
RAB5B-203ENST00000546810 DNASE1L2Q92874 299 aa14.37□□□□□ -0.11
RAB5B-203ENST00000546810 SRRTQ9BXP5 876 aaKnown RBP14.37□□□□□ -0.11
RAB5B-203ENST00000546810 TM4SF5O14894 197 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 SYN3O14994 580 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 POU2F2P09086 479 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 GTF2H1P32780 548 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 CNR2P34972 360 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 BRCC3P46736 316 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 CXCL12P48061 93 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 SRSF5Q13243 272 aaKnown RBP14.36□□□□□ -0.11
RAB5B-203ENST00000546810 PABPC1LQ4VXU2 614 aaKnown RBP14.36□□□□□ -0.11
RAB5B-203ENST00000546810 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
RAB5B-203ENST00000546810 CEP57Q86XR8 500 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 FAM114A1Q8IWE2 563 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 C3orf58Q8NDZ4 430 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 APPL2Q8NEU8 664 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 MCRS1Q96EZ8 462 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 SUSD3Q96L08 255 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 CLSTN3Q9BQT9 956 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 LMAN1LQ9HAT1 526 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 HCFC1R1Q9NWW0 138 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 DNMT3BQ9UBC3 853 aaKnown RBP14.36□□□□□ -0.11
RAB5B-203ENST00000546810 MAGEC2Q9UBF1 373 aaPredicted RBP14.36□□□□□ -0.11
RAB5B-203ENST00000546810 PTPRJQ12913 1337 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 DOCK6Q96HP0 2047 aa14.36□□□□□ -0.11
RAB5B-203ENST00000546810 C1QTNF9BB2RNN3 333 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 CHURC1-FNTBB4DL54 471 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 CLSTN1O94985 981 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 ODC1P11926 461 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 FNTBP49356 437 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 LILRA4P59901 499 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 DLG4P78352 724 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 SATB1Q01826 763 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 TANGO2Q6ICL3 276 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 UNQ6494/PRO21346Q6UXR6 183 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 CCDC150Q8NCX0 1101 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 SLC7A14Q8TBB6 771 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 PLEKHO2Q8TD55 490 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 FAM3CQ92520 227 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 THAP9Q9H5L6 903 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 TMEM8AQ9HCN3 771 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 GDE1Q9NZC3 331 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 DSEQ9UL01 958 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 PCDHB8Q9UN66 801 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 MRPS23Q9Y3D9 190 aaKnown RBP14.35□□□□□ -0.11
RAB5B-203ENST00000546810 CNOT1A5YKK6 2376 aaKnown RBP14.35□□□□□ -0.11
RAB5B-203ENST00000546810 PKD1L2Q7Z442 2459 aa14.35□□□□□ -0.11
RAB5B-203ENST00000546810 SYCE3A1L190 88 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 H7C4K7 107 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 PPEF2O14830 753 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 C4BPAP04003 597 aaKnown RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 TRIM49P0CI25 452 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 TRIM49CP0CI26 452 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 FGFR3P22607 806 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 ATICP31939 592 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 MARSP56192 900 aaKnown RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 MCCD1P59942 119 aaPredicted RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 PSMD5Q16401 504 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 ZACNQ401N2 412 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 TDRD10Q5VZ19 366 aaKnown RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 KRT39Q6A163 491 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 ANKS3Q6ZW76 656 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 SV2AQ7L0J3 742 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 CREBRFQ8IUR6 639 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 FAM160A2Q8N612 972 aaPredicted RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 C12orf50Q8NA57 414 aaPredicted RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 LNX1Q8TBB1 728 aaPredicted RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 ENOX1Q8TC92 643 aaKnown RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 PIK3R5Q8WYR1 880 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 ZNF516Q92618 1163 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 ELSPBP1Q96BH3 223 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 HPDLQ96IR7 371 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 SENP8Q96LD8 212 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 OXCT2Q9BYC2 517 aaPredicted RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 IMPG2Q9BZV3 1241 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 GZF1Q9H116 711 aaPredicted RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 MMRN2Q9H8L6 949 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 BRD9Q9H8M2 597 aa14.34□□□□□ -0.11
RAB5B-203ENST00000546810 FASNP49327 2511 aaKnown RBP14.34□□□□□ -0.11
RAB5B-203ENST00000546810 I3L4J1 428 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 M0QZQ0 153 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 CYB561D2O14569 222 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 HUS1O60921 280 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 TYMPP19971 482 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 TKTP29401 623 aaKnown RBP14.33□□□□□ -0.12
RAB5B-203ENST00000546810 PIK3CAP42336 1068 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 GCLMP48507 274 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 MXI1P50539 228 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 CETN1Q12798 172 aa14.33□□□□□ -0.12
RAB5B-203ENST00000546810 NCOA4Q13772 614 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms