RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PSMG2Q969U7 264 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 JAKMIP2Q96AA8 810 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 ARID3AQ99856 593 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 CRACR2AQ9BSW2 395 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 B3GNT5Q9BYG0 378 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 TAB2Q9NYJ8 693 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 HMGXB4Q9UGU5 601 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 TSC2P49815 1807 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 LRRC10BA6NIK2 292 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
CCDC38-203ENST00000546803 ZNF197O14709 1029 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 SOAT2O75908 522 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 BDNFP23560 247 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 FSHRP23945 695 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 CDR1P51861 262 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 EPHA5P54756 1037 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 CYP4A22Q5TCH4 519 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 SMYD5Q6GMV2 418 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 TRIM65Q6PJ69 517 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 DNAJB7Q7Z6W7 309 aaPredicted RBP17.88■□□□□ 0.45
CCDC38-203ENST00000546803 DHX40Q8IX18 779 aaKnown RBP17.88■□□□□ 0.45
CCDC38-203ENST00000546803 FAM200AQ8TCP9 573 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 ACSF2Q96CM8 615 aaPredicted RBP17.88■□□□□ 0.45
CCDC38-203ENST00000546803 TMEM176AQ96HP8 235 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 TWNKQ96RR1 684 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 CORO1BQ9BR76 489 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 ASAH2Q9NR71 780 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 HCFC1R1Q9NWW0 138 aa17.88■□□□□ 0.45
CCDC38-203ENST00000546803 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.88■□□□□ 0.45
CCDC38-203ENST00000546803 LIMA1Q9UHB6 759 aaKnown RBP17.88■□□□□ 0.45
CCDC38-203ENST00000546803 PLXNA3P51805 1871 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 C19orf67A6NJJ6 358 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 LOC730098B7Z3J9 87 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 TRIM66O15016 1216 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 MICAL2O94851 1124 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 FGF19O95750 216 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 CSH1P0DML2 217 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 CSH2P0DML3 217 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 ATF6P18850 670 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 PON1P27169 355 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 GRIK1P39086 918 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 RAD23BP54727 409 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 NTHL1P78549 312 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 ORC1Q13415 861 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 TAF12Q16514 161 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 PHLDB3Q6NSJ2 640 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 PDZD4Q76G19 769 aaPredicted RBP17.87■□□□□ 0.45
CCDC38-203ENST00000546803 FUKQ8N0W3 1084 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 PLCD3Q8N3E9 789 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 UBR7Q8N806 425 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 RPGRIP1Q96KN7 1286 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 C8orf48Q96LL4 319 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 UHRF1Q96T88 793 aaPredicted RBP17.87■□□□□ 0.45
CCDC38-203ENST00000546803 LPIN3Q9BQK8 851 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 MED10Q9BTT4 135 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 HSD3B7Q9H2F3 369 aa17.87■□□□□ 0.45
CCDC38-203ENST00000546803 ZFP37Q9Y6Q3 630 aaPredicted RBP17.87■□□□□ 0.45
CCDC38-203ENST00000546803 BRWD1Q9NSI6 2320 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 SLC9A1P19634 815 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 ANXA13P27216 316 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 COPB1P53618 953 aaKnown RBP17.86■□□□□ 0.45
CCDC38-203ENST00000546803 MFAP3P55082 362 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 IQCB1Q15051 598 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 DDR2Q16832 855 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 ZNF394Q53GI3 561 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 FKBP15Q5T1M5 1219 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 RRAGAQ7L523 313 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 FAM35AQ86V20 835 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 ARHGEF19Q8IW93 802 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 SCN4BQ8IWT1 228 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 C12orf29Q8N999 325 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 TDRD5Q8NAT2 981 aaKnown RBP17.86■□□□□ 0.45
CCDC38-203ENST00000546803 SLC4A11Q8NBS3 891 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 GIPC2Q8TF65 315 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 CYFIP2Q96F07 1278 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 SMARCD1Q96GM5 515 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 SPATA17Q96L03 361 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 HEXIM2Q96MH2 286 aaKnown RBP17.86■□□□□ 0.45
CCDC38-203ENST00000546803 HNRNPABQ99729 332 aaKnown RBP17.86■□□□□ 0.45
CCDC38-203ENST00000546803 ZNF518BQ9C0D4 1074 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 VPS16Q9H269 839 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 UBE2TQ9NPD8 197 aaPredicted RBP17.86■□□□□ 0.45
CCDC38-203ENST00000546803 APEX2Q9UBZ4 518 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 KIAA1257Q9ULG3 409 aa17.86■□□□□ 0.45
CCDC38-203ENST00000546803 MRPS23Q9Y3D9 190 aaKnown RBP17.86■□□□□ 0.45
CCDC38-203ENST00000546803 COL6A3P12111 3177 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 CLDN5O00501 218 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 PAEPP09466 180 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 CCDC130P13994 396 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 ACO1P21399 889 aaKnown RBP17.85■□□□□ 0.45
CCDC38-203ENST00000546803 GPR15P49685 360 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 TPM4P67936 248 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 PAQR9Q6ZVX9 377 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 GET4Q7L5D6 327 aaPredicted RBP17.85■□□□□ 0.45
CCDC38-203ENST00000546803 TMC8Q8IU68 726 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 ZDHHC14Q8IZN3 488 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 HS6ST3Q8IZP7 471 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 GJD3Q8N144 294 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 SLC2A14Q8TDB8 520 aa17.85■□□□□ 0.45
CCDC38-203ENST00000546803 KAT5Q92993 513 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms