RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 USP33Q8TEY7 942 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 MPHOSPH6Q99547 160 aaKnown RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TTC1Q99614 292 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 NINJ2Q9NZG7 142 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 PCYOX1Q9UHG3 505 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 GOLGA8TH3BQL2 631 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 I3L4J1 428 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 KIF3CO14782 793 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TTC4O95801 387 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 SP2Q02086 613 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 GEN1Q17RS7 908 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ANKRD20A2Q5SQ80 823 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ANKRD20A1Q5TYW2 823 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 CRELD2Q6UXH1 353 aaPredicted RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 VSIG10LQ86VR7 867 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 LMNTD2Q8IXW0 634 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TMEM192Q8IY95 271 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 NDRG1Q92597 394 aaKnown RBP10.27□□□□□ -0.77
TRAF1-203ENST00000546084 SERPINB12Q96P63 405 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 NUDCD1Q96RS6 583 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 HERPUD2Q9BSE4 406 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 VPS11Q9H270 941 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 TXLNGQ9NUQ3 528 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 UBP1Q9NZI7 540 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 IP6K2Q9UHH9 426 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 PACSIN3Q9UKS6 424 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 SCINQ9Y6U3 715 aa10.27□□□□□ -0.77
TRAF1-203ENST00000546084 A8MXQ7 604 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 CFLARO15519 480 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ATP9BO43861 1147 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 AKAP5P24588 427 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ARPP19P56211 112 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 AP1B1Q10567 949 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 SPDYCQ5MJ68 293 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ATF7IP2Q5U623 682 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 DENND1BQ6P3S1 775 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ZCCHC23Q6ZST2 131 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 SHC3Q92529 594 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ZNF516Q92618 1163 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 FAM136AQ96C01 138 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 TRIM56Q9BRZ2 755 aaKnown RBP10.26□□□□□ -0.77
TRAF1-203ENST00000546084 RXFP1Q9HBX9 757 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 PCDHA3Q9Y5H8 950 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 COMMD10Q9Y6G5 202 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ITGB4P16144 1822 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 CNTRLQ7Z7A1 2325 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 CDH16O75309 829 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 USP12O75317 370 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 SUPT20HL2P0C7V6 817 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ITIH2P19823 946 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 ITKQ08881 620 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 SH3PXD2AQ5TCZ1 1133 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 DPY19L2P1Q6NXN4 242 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 FBXO36Q8NEA4 188 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 JOSD2Q8TAC2 188 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 HELQQ8TDG4 1101 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 OSBPL1AQ9BXW6 950 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 DCLK3Q9C098 648 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 BATF3Q9NR55 127 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 PCMTD2Q9NV79 361 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 CACNG4Q9UBN1 327 aa10.26□□□□□ -0.77
TRAF1-203ENST00000546084 DYNC1LI2O43237 492 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 LPXNO60711 386 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 PTPRAP18433 802 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ACAT1P24752 427 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 PHBP35232 272 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ALDH18A1P54886 795 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ARL4CP56559 192 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 SLC8A3P57103 927 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ZNF268Q14587 947 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 PCGF5Q86SE9 256 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 LONP2Q86WA8 852 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ART4Q93070 314 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 RPS6KC1Q96S38 1066 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 TXLNGYQ9BZA5 131 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 APOBEC3GQ9HC16 384 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 XPNPEP1Q9NQW7 623 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 SDK1Q7Z5N4 2213 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 IRS2Q9Y4H2 1338 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 A0A1B0GUL6 1792 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 SMIM24O75264 130 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 PROSCO94903 275 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ENO1P06733 434 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ADRA1DP25100 572 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 GTF2A2P52657 109 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 FAM131BQ86XD5 332 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ZC3H3Q8IXZ2 948 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 SLC25A41Q8N5S1 370 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 HASPINQ8TF76 798 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 TRIM11Q96F44 468 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 RBM41Q96IZ5 413 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ASCC2Q9H1I8 757 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 PTPRJQ12913 1337 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 MYO18AQ92614 2054 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 MAPK13O15264 365 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 FAM155BO75949 473 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 UBA1P22314 1058 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms