RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 KLHL38Q2WGJ6 581 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 TKFCQ3LXA3 575 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 FAM133BQ5BKY9 247 aaKnown RBP6.82□□□□□ -1.32
SNHG1-225ENST00000545920 IZUMO3Q5VZ72 239 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 SLFN12LQ6IEE8 588 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 C15orf39Q6ZRI6 1047 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 CENPUQ71F23 418 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 MON1BQ7L1V2 547 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 POLNQ7Z5Q5 900 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 ADAT2Q7Z6V5 191 aaKnown RBP6.82□□□□□ -1.32
SNHG1-225ENST00000545920 SLC47A2Q86VL8 602 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 CCDC25Q86WR0 208 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 LDHDQ86WU2 507 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 VSIG1Q86XK7 387 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 GPD1LQ8N335 351 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 NIPA2Q8N8Q9 360 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 TMEM161BQ8NDZ6 487 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 CYP2W1Q8TAV3 490 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 LRRC8CQ8TDW0 803 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 AGAP11Q8TF27 550 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 FAM151AQ8WW52 585 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 EDEM1Q92611 657 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 ATP6V0A1Q93050 837 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 TBC1D31Q96DN5 1066 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 AGBL1Q96MI9 1066 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 CBWD1Q9BRT8 395 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 NIFKQ9BYG3 293 aaKnown RBP6.82□□□□□ -1.32
SNHG1-225ENST00000545920 OSBPL8Q9BZF1 889 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 VPS33BQ9H267 617 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 VPS11Q9H270 941 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 FAM124BQ9H5Z6 455 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-225ENST00000545920 DCLRE1BQ9H816 532 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.82□□□□□ -1.32
SNHG1-225ENST00000545920 PCDH9Q9HC56 1237 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 POLD4Q9HCU8 107 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 KCNH7Q9NS40 1196 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 PSMC3IPQ9P2W1 217 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-225ENST00000545920 ZNF232Q9UNY5 417 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 AGAP1Q9UPQ3 857 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 PTPN22Q9Y2R2 807 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 STYXL1Q9Y6J8 313 aa6.82□□□□□ -1.32
SNHG1-225ENST00000545920 NRXN2Q9P2S2 1712 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 MYPNQ86TC9 1320 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 LTBP4Q8N2S1 1624 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 SMIM23A6NLE4 172 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ANKRD63C9JTQ0 380 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 WDR46O15213 610 aaKnown RBP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 EXTL3O43909 919 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ECE2O60344 883 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 DNAJC6O75061 913 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ATP2C2O75185 946 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 GSTA2P09210 222 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ARP10275 920 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 DLATP10515 647 aaKnown RBP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 NEFHP12036 1026 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ACADSP16219 412 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 PTPN4P29074 926 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 CNGA1P29973 690 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 SLCO1A2P46721 670 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 GSK3AP49840 483 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 YWHAEP62258 255 aaKnown RBP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 MAP3K10Q02779 954 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 PIGHQ14442 188 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 KRT72Q14CN4 511 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 E2F5Q15329 346 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 SURF1Q15526 300 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 TBCCQ15814 346 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 KYNUQ16719 465 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 PTPROQ16827 1216 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 EFHC2Q5JST6 749 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 HHATQ5VTY9 493 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 C4orf22Q6V702 233 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 BZW1Q7L1Q6 419 aaKnown RBP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 FAM83AQ86UY5 434 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 CHSY1Q86X52 802 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 NT5DC4Q86YG4 428 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.81□□□□□ -1.324e-6■■■■■ 36.2
SNHG1-225ENST00000545920 ABRAQ8N0Z2 381 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 FITM2Q8N6M3 262 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ALLCQ8N6M5 410 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ATP11CQ8NB49 1132 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 FEZF2Q8TBJ5 459 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 RAB3IL1Q8TBN0 382 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 GPRASP2Q96D09 838 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ITPKCQ96DU7 683 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 STAMBPL1Q96FJ0 436 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 CSRNP1Q96S65 589 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 RBM15Q96T37 977 aaKnown RBP eCLIP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 DDX23Q9BUQ8 820 aaKnown RBP6.81□□□□□ -1.32
SNHG1-225ENST00000545920 TRABDQ9H4I3 376 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 KMT5AQ9NQR1 393 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 CYP39A1Q9NYL5 469 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 KLK14Q9P0G3 267 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ADAM22Q9P0K1 906 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 STOML1Q9UBI4 398 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 DNAJB4Q9UDY4 337 aa6.81□□□□□ -1.32
SNHG1-225ENST00000545920 ZBTB21Q9ULJ3 1066 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms