RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 DCAF4L1Q3SXM0 396 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 GRAMD4Q6IC98 578 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 C3orf62Q6ZUJ4 267 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 SLFN11Q7Z7L1 901 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PACS2Q86VP3 889 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 LONP2Q86WA8 852 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 CCDC60Q8IWA6 550 aaPredicted RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 RNF169Q8NCN4 708 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 OR6J1Q8NGC5 347 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 SPATA18Q8TC71 538 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 NRBF2Q96F24 287 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 HPDLQ96IR7 371 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 PCDHB18PQ96TA0 734 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 EFHD1Q9BUP0 239 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 NT5C1AQ9BXI3 368 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 SPC25Q9HBM1 224 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 DPP3Q9NY33 737 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 IPO11Q9UI26 975 aaKnown RBP6.06□□□□□ -1.44
VPS50-220ENST00000544910 MID2Q9UJV3 735 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 CHMP2BQ9UQN3 213 aa6.06□□□□□ -1.44
VPS50-220ENST00000544910 DDX60LQ5H9U9 1706 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 ASTN2O75129 1339 aaPredicted RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 GOLGA8RI6L899 631 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 IGF2BP3O00425 579 aaKnown RBP eCLIP6.05□□□□□ -1.44
VPS50-220ENST00000544910 DNALI1O14645 258 aaPredicted RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 ARL1P40616 181 aaPredicted RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 ITKQ08881 620 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 MAMLD1Q13495 774 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ZNF484Q5JVG2 852 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 SYCP2LQ5T4T6 812 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 TDRD10Q5VZ19 366 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 METTL7BQ6UX53 244 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 C4orf22Q6V702 233 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 PRELID2Q8N945 189 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 PIP4K2CQ8TBX8 421 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ERVK-5Q9HDB9 667 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 CHST7Q9NS84 486 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 PHTF1Q9UMS5 762 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 MAGED2Q9UNF1 606 aaPredicted RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 F5H423 210 aaPredicted RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 CALCAP01258 141 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 MX2P20592 715 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ATICP31939 592 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 RTP1P59025 263 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 CDC42EP1Q00587 391 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 OTUD4Q01804 1114 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 SLC20A2Q08357 652 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 EFHC2Q5JST6 749 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.05□□□□□ -1.44
VPS50-220ENST00000544910 VSIG10LQ86VR7 867 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 BRSK2Q8IWQ3 736 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 FBXO36Q8NEA4 188 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 MANSC1Q9H8J5 431 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.05□□□□□ -1.44
VPS50-220ENST00000544910 KLHL8Q9P2G9 620 aaPredicted RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 PPARGC1AQ9UBK2 798 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 TNRC6CQ9HCJ0 1690 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 OPLAHO14841 1288 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 VDRP11473 427 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 NQO1P15559 274 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 PCYT1AP49585 367 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 VCPP55072 806 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 ORC1Q13415 861 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 DSTYKQ6XUX3 929 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 CATSPERGQ6ZRH7 1159 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 NUDCD3Q8IVD9 361 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 IQCKQ8N0W5 287 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ZCCHC9Q8N567 271 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 CXorf38Q8TB03 319 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 NEUROG2Q9H2A3 272 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ST6GALNAC4Q9H4F1 302 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 PCDH9Q9HC56 1237 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ACP6Q9NPH0 428 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 DMAC2Q9NW81 257 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ZC3H7BQ9UGR2 993 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 STAP1Q9ULZ2 295 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 RPTORQ8N122 1335 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 GNAT1P11488 350 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 GLRA2P23416 452 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 CCND1P24385 295 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 SERPINB9P50453 376 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 KPNA2P52292 529 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 HADHBP55084 474 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 PPATQ06203 517 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 LAMC2Q13753 1193 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 THOC5Q13769 683 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 ZPBP2Q6X784 338 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ANO5Q75V66 913 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 APPL2Q8NEU8 664 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 CLEC4DQ8WXI8 215 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 KREMEN1Q96MU8 473 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 SLITRK1Q96PX8 696 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ADAM33Q9BZ11 813 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 CD248Q9HCU0 757 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 ALG13Q9NP73 1137 aaKnown RBP6.05□□□□□ -1.44
VPS50-220ENST00000544910 CYP39A1Q9NYL5 469 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 SLC24A2Q9UI40 661 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 TLK1Q9UKI8 766 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 POLIQ9UNA4 740 aa6.05□□□□□ -1.44
VPS50-220ENST00000544910 NAALADL1Q9UQQ1 740 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms