RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 RSPO2Q6UXX9 243 aaPredicted RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 RTL10Q7L3V2 364 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 DGLUCYQ7Z3D6 616 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 CEP57Q86XR8 500 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 VSTM4Q8IW00 320 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 NPAS3Q8IXF0 933 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 SUMF1Q8NBK3 374 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 ITFG1Q8TB96 612 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 SLC7A14Q8TBB6 771 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 EPS8L1Q8TE68 723 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 PARD3BQ8TEW8 1205 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 SLC35C1Q96A29 364 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 JAKMIP2Q96AA8 810 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 BICD1Q96G01 975 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 BCO2Q9BYV7 579 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 OSBPL6Q9BZF3 934 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 XPO4Q9C0E2 1151 aaKnown RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 CXCL16Q9H2A7 254 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 ASB7Q9H672 318 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 SNTG2Q9NY99 539 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 DLL3Q9NYJ7 618 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 IFNKQ9P0W0 207 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 MTRRQ9UBK8 725 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 FBXO4Q9UKT5 387 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 AGO2Q9UKV8 859 aaKnown RBP7.07□□□□□ -1.28
CDCA3-209ENST00000544610 DERAQ9Y315 318 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 COQ4Q9Y3A0 265 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 WDR87Q6ZQQ6 2873 aa7.07□□□□□ -1.28
CDCA3-209ENST00000544610 PATJQ8NI35 1801 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 MTCL1Q9Y4B5 1905 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 DOCK8Q8NF50 2099 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CCL16O15467 120 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 LAMTOR5O43504 91 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 NRDCO43847 1150 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 AFPP02771 609 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 EDN1P05305 212 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 FGFR3P22607 806 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 ANXA13P27216 316 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 OR1D2P34982 312 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 VAMP7P51809 220 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CYP24A1Q07973 514 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 KCNH2Q12809 1159 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 PUM1Q14671 1186 aaKnown RBP eCLIP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 PABPC1LQ4VXU2 614 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 SLC44A4Q53GD3 710 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CEP135Q66GS9 1140 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CNGA4Q8IV77 575 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 BRSK2Q8IWQ3 736 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 DRC7Q8IY82 874 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CCDC150Q8NCX0 1101 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CCDC112Q8NEF3 446 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 SYN2Q92777 582 aaPredicted RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 PPP1R10Q96QC0 940 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 HINFPQ9BQA5 517 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 KXD1Q9BQD3 176 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CBWD1Q9BRT8 395 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 TARS2Q9BW92 718 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 NAA15Q9BXJ9 866 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 LTB4R2Q9NPC1 389 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 AVENQ9NQS1 362 aaPredicted RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 SPATA6Q9NWH7 488 aaPredicted RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 HCFC1R1Q9NWW0 138 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 DNMT3BQ9UBC3 853 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CPSF3Q9UKF6 684 aaKnown RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 POLIQ9UNA4 740 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 C2CD2Q9Y426 696 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 MTF2Q9Y483 593 aaPredicted RBP7.06□□□□□ -1.28
CDCA3-209ENST00000544610 PCDHGA2Q9Y5H1 932 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 BACE2Q9Y5Z0 518 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CDY1Q9Y6F8 540 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 CACNA1AO00555 2505 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 GVINP1Q7Z2Y8 2422 aa7.06□□□□□ -1.28
CDCA3-209ENST00000544610 SPTBN4Q9H254 2564 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 FAM170BA6NMN3 283 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 ANKRD63C9JTQ0 380 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 AP5Z1O43299 807 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 ATP9BO43861 1147 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 ECI2O75521 394 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 B3GAT3O94766 335 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 HNRNPH3P31942 346 aaKnown RBP7.05□□□□□ -1.28
CDCA3-209ENST00000544610 GRM5P41594 1212 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 RPS9P46781 194 aaKnown RBP7.05□□□□□ -1.28
CDCA3-209ENST00000544610 CLCNKBP51801 687 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 CDK17Q00537 523 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 UBXN1Q04323 297 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 TBX2Q13207 712 aaPredicted RBP7.05□□□□□ -1.28
CDCA3-209ENST00000544610 UBXN2BQ14CS0 331 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 NR6A1Q15406 480 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 UPP1Q16831 310 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 EXOC3L4Q17RC7 722 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 SLC5A9Q2M3M2 681 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 ZNF568Q3ZCX4 644 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 XKR4Q5GH76 650 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 EEF1DP3Q658K8 133 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 KRT39Q6A163 491 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 CD300LGQ6UXG3 332 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 GBP6Q6ZN66 633 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 TPRG1Q6ZUI0 275 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 ANKS3Q6ZW76 656 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms