RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 APBA1Q02410 837 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 TWF1Q12792 350 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 PLD1Q13393 1074 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 MGAT5BQ3V5L5 792 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 ZNF394Q53GI3 561 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 ATAT1Q5SQI0 421 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 PTCRAQ6ISU1 281 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 DPY19L2P1Q6NXN4 242 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 GJB7Q6PEY0 223 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 SLC4A11Q8NBS3 891 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 SMG7Q92540 1137 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 TMEM176AQ96HP8 235 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 SEPT5Q99719 369 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 B3GNT5Q9BYG0 378 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 SOAT2O75908 522 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 SLC34A2O95436 690 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 CYP2F1P24903 491 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 MTHFRP42898 656 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 UBXN1Q04323 297 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 FILIP1LQ4L180 1135 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 VSTM1Q6UX27 236 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 C12orf29Q8N999 325 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 RIPOR3Q96MK2 946 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 LSM14BQ9BX40 385 aaKnown RBP18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 PIDD1Q9HB75 910 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 PLCB1Q9NQ66 1216 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 CDH22Q9UJ99 828 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 FAM50BQ9Y247 325 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 PCDHB4Q9Y5E5 795 aa18.2■□□□□ 0.5
RABGGTA-203ENST00000543002 BDNFP23560 247 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 EPHB3P54753 998 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 RPL10AP62906 217 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 CBX2Q14781 532 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 KLHDC7AQ5VTJ3 777 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 SMYD5Q6GMV2 418 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 TMEM270Q6UE05 265 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 PAQR9Q6ZVX9 377 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 FUKQ8N0W3 1084 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 HEXIM2Q96MH2 286 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 NECTIN4Q96NY8 510 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 ASB2Q96Q27 587 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 ERGIC2Q96RQ1 377 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 ZNF518BQ9C0D4 1074 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 CEP72Q9P209 647 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 DNAJC12Q9UKB3 198 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 CNTN6Q9UQ52 1028 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 SIK3Q9Y2K2 1263 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 ATP8B3O60423 1300 aa18.19■□□□□ 0.5
RABGGTA-203ENST00000543002 A0A1B0GTH6 734 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 CLDN5O00501 218 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 SERPINC1P01008 464 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 CCDC130P13994 396 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 ATF6P18850 670 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 KCNQ1P51787 676 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 FANCCQ00597 558 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 SYCP1Q15431 976 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 SMAD2Q15796 467 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 FAM35AQ86V20 835 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 ELMOD1Q8N336 334 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 SLC2A14Q8TDB8 520 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 CYFIP2Q96F07 1278 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 ZNF512Q96ME7 567 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 NAP1L5Q96NT1 182 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 HNRNPABQ99729 332 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 MED10Q9BTT4 135 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 FAM49BQ9NUQ9 324 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 DNMT3BQ9UBC3 853 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 ASB3Q9Y575 518 aa18.18■□□□□ 0.5
RABGGTA-203ENST00000543002 RNF225M0QZC1 329 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 PAEPP09466 180 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 UCHL3P15374 230 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 PTPN2P17706 415 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 RFX1P22670 979 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 GRIK1P39086 918 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 KLK7P49862 253 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 ZNF132P52740 706 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 VEPH1Q14D04 833 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 DDR2Q16832 855 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 ARHGAP44Q17R89 818 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 ARHGAP17Q68EM7 881 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 IQCEQ6IPM2 695 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 GRASPQ7Z6J2 395 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 SCN4BQ8IWT1 228 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 RBBP8NLQ8NC74 664 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 RNF214Q8ND24 703 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 SHC3Q92529 594 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 SMARCD1Q96GM5 515 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 WDR6Q9NNW5 1121 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 AJAP1Q9UKB5 411 aaPredicted RBP18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 KIAA1257Q9ULG3 409 aa18.17■□□□□ 0.5
RABGGTA-203ENST00000543002 TRIM66O15016 1216 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 TEX33O43247 280 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 VDRP11473 427 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 KRT5P13647 590 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 IL9P15248 144 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 PTPRDP23468 1912 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 GPR15P49685 360 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 NR1I3Q14994 352 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms