RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 KIF11P52732 1056 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 KRT83P78385 493 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 CDR2Q01850 454 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 SLC18A3Q16572 532 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 SOWAHAQ2M3V2 549 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 C10orf76Q5T2E6 689 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 SCARA5Q6ZMJ2 495 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 TRIM72Q6ZMU5 477 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 ZSCAN30Q86W11 494 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 ZNF280BQ86YH2 543 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 SENP8Q96LD8 212 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 RIPOR3Q96MK2 946 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 CHP1Q99653 195 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 NRDE2Q9H7Z3 1164 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 STK39Q9UEW8 545 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 GABRDO14764 452 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SYN3O14994 580 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 MED7O43513 233 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 AKR1B10O60218 316 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 KIF4AO95239 1232 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ALDH2P05091 517 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 WEE2P0C1S8 567 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PNMA6AP0CW24 399 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 LAG3P18627 525 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CD58P19256 250 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GNA15P30679 374 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 OR1G1P47890 313 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 HTRA4P83105 476 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ARID5AQ03989 594 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 HYAL1Q12794 435 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SPA17Q15506 151 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 POTEHQ6S545 545 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 RAD9BQ6WBX8 426 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ADGRF2Q8IZF7 708 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 C3orf58Q8NDZ4 430 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TMEM176AQ96HP8 235 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TNIP3Q96KP6 325 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 AGPAT1Q99943 283 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 OXCT2Q9BYC2 517 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SDCBP2Q9H190 292 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 L1RE1Q9UN81 338 aa13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SF3B1O75533 1304 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 NRP1O14786 923 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 UPP2O95045 317 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GALTP07902 379 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CCDC175P0C221 793 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 VDRP11473 427 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GZMAP12544 262 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PCSK1P29120 753 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 RAP1GAPP47736 663 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ALDH7A1P49419 539 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 RAD23BP54727 409 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GPM6BQ13491 265 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CD300LGQ6UXG3 332 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF662Q6ZS27 426 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 NOP9Q86U38 636 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SLC47A2Q86VL8 602 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 METTL23Q86XA0 190 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CRYBG2Q8N1P7 616 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PDCL2Q8N4E4 241 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 KIAA1524Q8TCG1 905 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 WHAMMQ8TF30 809 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 KBTBD7Q8WVZ9 684 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 DDX1Q92499 740 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ZNF830Q96NB3 372 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SAMD11Q96NU1 681 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PAAF1Q9BRP4 392 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SNX25Q9H3E2 840 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ADAM28Q9UKQ2 775 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PCDHGC3Q9UN70 934 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FAN1Q9Y2M0 1017 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 INSL6Q9Y581 213 aa13.07□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 A8MXQ7 604 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 B4GALT3O60512 393 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PLEKP08567 350 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 PPM1AP35813 382 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GNL1P36915 607 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 SLC11A1P49279 550 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 GATMP50440 423 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 NDST1P52848 882 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 CDH8P55286 799 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 BCAR1P56945 870 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 BTG3Q14201 252 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 ARHGAP17Q68EM7 881 aa13.06□□□□□ -0.32
CACNA1C-IT3-201ENST00000542680 FAM117BQ6P1L5 589 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms