RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 TRPV6Q9H1D0 765 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 FAM153AQ9UHL3 310 aa10.65□□□□□ -0.71
TOP3A-208ENST00000542570 HCRTO43612 131 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 LYPLA2O95372 231 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 MYBL1P10243 752 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 TKTL1P51854 596 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 TPI1P60174 286 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ROR1Q01973 937 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 IFT88Q13099 833 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 NOL9Q5SY16 702 aaKnown RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 PCGF5Q86SE9 256 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 WHAMMQ8TF30 809 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 EXT2Q93063 718 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 CELF6Q96J87 481 aaKnown RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 SENP8Q96LD8 212 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 RBM15Q96T37 977 aaKnown RBP eCLIP10.64□□□□□ -0.715e-11■■■■■ 35.8
TOP3A-208ENST00000542570 TSPYL2Q9H2G4 693 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 MED4Q9NPJ6 270 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 HOMER3Q9NSC5 361 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 CHMP2BQ9UQN3 213 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 MROH7Q68CQ1 1323 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 PHBP35232 272 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ARHGAP1Q07960 439 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 SH3D19Q5HYK7 790 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 PAPD7Q5XG87 772 aaKnown RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 CENPUQ71F23 418 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 EPM2AIP1Q7L775 607 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 IFNL1Q8IU54 200 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 CREG2Q8IUH2 290 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ARRDC4Q8NCT1 418 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 STKLD1Q8NE28 680 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ZNF516Q92618 1163 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ANKZF1Q9H8Y5 726 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 TNFSF13BQ9Y275 285 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 CNTNAP2Q9UHC6 1331 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 DCDC2CA8MYV0 355 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 RASA4BC9J798 803 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 RASA4O43374 803 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 TRAPPC3O43617 180 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ALDH1A1P00352 501 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 VDRP11473 427 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 PCSK1P29120 753 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ITGA8P53708 1063 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 INHBEP58166 350 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 GCNT1Q02742 428 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 SLC29A2Q14542 456 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 SNX17Q15036 470 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 BMT2Q1RMZ1 405 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ACCSLQ4AC99 568 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 C10orf120Q5SQS8 335 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 NT5DC3Q86UY8 548 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ACTL9Q8TC94 416 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 SHC3Q92529 594 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 ZBED3Q96IU2 234 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 APOBEC3GQ9HC16 384 aaKnown RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 CHST7Q9NS84 486 aa10.64□□□□□ -0.71
TOP3A-208ENST00000542570 BARX2Q9UMQ3 279 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-208ENST00000542570 UBR2Q8IWV8 1755 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 PABPN1LA6NDY0 278 aaKnown RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 CTIFO43310 598 aaKnown RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 SNAI1O95863 264 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 USP17L7P0C7H9 530 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 GZMAP12544 262 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 ATP5DP30049 168 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 ARL2P36404 184 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 CUL1Q13616 776 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 MYBPC2Q14324 1141 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 PIGHQ14442 188 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 CCDC6Q16204 474 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 CTXN3Q4LDR2 81 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 TAF2Q6P1X5 1199 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 C4orf33Q8N1A6 199 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 C1orf127Q8N9H9 656 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 AGR3Q8TD06 166 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 GIPC2Q8TF65 315 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 ALG3Q92685 438 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 RSAD1Q9HA92 442 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 SLC38A7Q9NVC3 462 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 RASSF10A6NK89 507 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 GOLGA8KD6RF30 607 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 SPTLC1O15269 473 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 MT-ND3P03897 115 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 ETS1P14921 441 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 EPHB1P54762 984 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 OTUD4Q01804 1114 aaKnown RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 ITGA7Q13683 1181 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 OVOS1Q6IE37 1185 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 MYLK4Q86YV6 388 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 FAM71AQ8IYT1 594 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 TTC17Q96AE7 1141 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 SMC6Q96SB8 1091 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 PCYT2Q99447 389 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 SYT15Q9BQS2 421 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 MRPL45Q9BRJ2 306 aaKnown RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 PLEKHA5Q9HAU0 1116 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 SLC27A5Q9Y2P5 690 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 CNTRLQ7Z7A1 2325 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 APOL1O14791 398 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms