RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 TCHHQ07283 1943 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 MYBPHLA2RUH7 354 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 SLC38A8A6NNN8 435 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 KINO60870 393 aaKnown RBP21.65■■□□□ 1.06
DDB1-220ENST00000542337 PDGFRBP09619 1106 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 GNL1P36915 607 aaPredicted RBP21.65■■□□□ 1.06
DDB1-220ENST00000542337 MAGEA11P43364 429 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 SYKP43405 635 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 AP3M2P53677 418 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 LRRC32Q14392 662 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 SDHAF4Q5VUM1 108 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 LIMS2Q7Z4I7 341 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 MAML2Q8IZL2 1156 aaPredicted RBP21.65■■□□□ 1.06
DDB1-220ENST00000542337 FSIP1Q8NA03 581 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 PKMYT1Q99640 499 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 SCAND2PQ9GZW5 306 aaPredicted RBP21.65■■□□□ 1.06
DDB1-220ENST00000542337 CHRDQ9H2X0 955 aa21.65■■□□□ 1.06
DDB1-220ENST00000542337 NCANO14594 1321 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 NOL4O94818 638 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 CLSTN1O94985 981 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 KIF20AO95235 890 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 PRAMEF12O95522 483 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 CST3P01034 146 aaPredicted RBP21.64■■□□□ 1.05
DDB1-220ENST00000542337 LMO2P25791 158 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 ATICP31939 592 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 FZD5Q13467 585 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 WDR72Q3MJ13 1102 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 KMT5BQ4FZB7 885 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 CC2D1AQ6P1N0 951 aaPredicted RBP21.64■■□□□ 1.05
DDB1-220ENST00000542337 MON1AQ86VX9 555 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 RALGPS2Q86X27 583 aaPredicted RBP21.64■■□□□ 1.05
DDB1-220ENST00000542337 OR6B3Q8NGW1 331 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 KBTBD7Q8WVZ9 684 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 SYAP1Q96A49 352 aaPredicted RBP21.64■■□□□ 1.05
DDB1-220ENST00000542337 TRMT2BQ96GJ1 504 aaKnown RBP21.64■■□□□ 1.05
DDB1-220ENST00000542337 ZFYVE19Q96K21 471 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 MYRFLQ96LU7 910 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 LRRC3BQ96PB8 259 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 KIF9Q9HAQ2 790 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 EHD2Q9NZN4 543 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 PCDHGA2Q9Y5H1 932 aa21.64■■□□□ 1.05
DDB1-220ENST00000542337 SHISA7A6NL88 538 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 KLRC4O43908 158 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 ATP2C2O75185 946 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 TACC1O75410 805 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 ANXA13P27216 316 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 GRIK1P39086 918 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 PSMC1P62191 440 aaKnown RBP21.63■■□□□ 1.05
DDB1-220ENST00000542337 CYP27A1Q02318 531 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 STK4Q13043 487 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 MTAPQ13126 283 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 BIRC3Q13489 604 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 TXNDC8Q6A555 127 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 VSTM1Q6UX27 236 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 TMEM150AQ86TG1 271 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 MYLPFQ96A32 169 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 CEP295NLQ96MC4 621 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 FAM126AQ9BYI3 521 aaPredicted RBP21.63■■□□□ 1.05
DDB1-220ENST00000542337 SMG9Q9H0W8 520 aaKnown RBP21.63■■□□□ 1.05
DDB1-220ENST00000542337 TDP1Q9NUW8 608 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 ZSCAN32Q9NX65 697 aa21.63■■□□□ 1.05
DDB1-220ENST00000542337 SPECC1L-ADORA2AF8WAN1 911 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 HCRTO43612 131 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 CCR3P51677 355 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 NRLP54845 237 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 ITPRIPL2Q3MIP1 535 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 MAMSTRQ6ZN01 415 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 ZNF687Q8N1G0 1237 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 TTC8Q8TAM2 541 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 MYCBPAPQ8TBZ2 947 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 CCDC34Q96HJ3 373 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 HINFPQ9BQA5 517 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 MRPL45Q9BRJ2 306 aaKnown RBP21.62■■□□□ 1.05
DDB1-220ENST00000542337 TRPC7Q9HCX4 862 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 GKN1Q9NS71 199 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 GTSE1Q9NYZ3 720 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 NXF1Q9UBU9 619 aaKnown RBP21.62■■□□□ 1.05
DDB1-220ENST00000542337 HPSEQ9Y251 543 aa21.62■■□□□ 1.05
DDB1-220ENST00000542337 PTPRZ1P23471 2315 aaPredicted RBP21.62■■□□□ 1.05
DDB1-220ENST00000542337 MIA3Q5JRA6 1907 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 COL4A3Q01955 1670 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 TRAV19A0A0A6YYK7 116 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 PDXKO00764 312 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 TRIM66O15016 1216 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 CALUO43852 315 aaPredicted RBP21.61■■□□□ 1.05
DDB1-220ENST00000542337 STAU1O95793 577 aaKnown RBP21.61■■□□□ 1.05
DDB1-220ENST00000542337 CHRNB1P11230 501 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 BDNFP23560 247 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 CTHP32929 405 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 PDE6CP51160 858 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 MYL6P60660 151 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 AMPD2Q01433 879 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 ZNF268Q14587 947 aaPredicted RBP21.61■■□□□ 1.05
DDB1-220ENST00000542337 DGKKQ5KSL6 1271 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 SLC9A9Q8IVB4 645 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 KIAA0895Q8NCT3 520 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 STKLD1Q8NE28 680 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 ZNF516Q92618 1163 aa21.61■■□□□ 1.05
DDB1-220ENST00000542337 USP13Q92995 863 aaPredicted RBP21.61■■□□□ 1.05
DDB1-220ENST00000542337 SPATA17Q96L03 361 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms