RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 ZIC5Q96T25 663 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 CDHR5Q9HBB8 845 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 CYLDQ9NQC7 956 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 MTRF1LQ9UGC7 380 aaKnown RBP15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 ATP8A1Q9Y2Q0 1164 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 SNX24Q9Y343 169 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 C5orf60A6NFR6 353 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 GPR182O15218 404 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 SKIP12755 728 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 RARGP13631 454 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 APLP1P51693 650 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 ACAP1Q15027 740 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 FEZF2Q8TBJ5 459 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 SLC38A7Q9NVC3 462 aa15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 PIN4Q9Y237 131 aaKnown RBP15.49■□□□□ 0.07
SPOCK3-226ENST00000541354 PIRO00625 290 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 ATMINO43313 823 aaPredicted RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 MAMLD1Q13495 774 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 ZNF268Q14587 947 aaPredicted RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 KRT71Q3SY84 523 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 MICALCLQ6ZW33 695 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 MRPL10Q7Z7H8 261 aaKnown RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 RNF180Q86T96 592 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 SLC4A11Q8NBS3 891 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 RNF25Q96BH1 459 aaPredicted RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 ARHGAP39Q9C0H5 1083 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 SNTG2Q9NY99 539 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 WHRNQ9P202 907 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 DDX20Q9UHI6 824 aaKnown RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 MYADML2A6NDP7 307 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 RRM1P23921 792 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 PLTPP55058 493 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 PPP1R15BQ5SWA1 713 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 C6orf89Q6UWU4 347 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 ADAT2Q7Z6V5 191 aaKnown RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 TADA2BQ86TJ2 420 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 FAM228AQ86W67 206 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 CDR2LQ86X02 465 aaPredicted RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 STK32AQ8WU08 396 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 EIF2AQ9BY44 585 aaKnown RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 ANAPC7Q9UJX3 599 aa15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 NOVA2Q9UNW9 492 aaKnown RBP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPOCK3-226ENST00000541354 GMNCA6NCL1 334 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 RECQL4O94761 1208 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 PIGHQ14442 188 aaPredicted RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 SV2CQ496J9 727 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 C9orf57Q5W0N0 161 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 ARHGAP17Q68EM7 881 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 LCLAT1Q6UWP7 414 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 SLAIN1Q8ND83 568 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 CPA5Q8WXQ8 436 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 FAM84AQ96KN4 292 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 NCAPGQ9BPX3 1015 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 NT5C1AQ9BXI3 368 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 TRIM31Q9BZY9 425 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 UBN1Q9NPG3 1134 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 POLIQ9UNA4 740 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 CDY2AQ9Y6F7 541 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 TCRBV7S2A1N4TA0A589 114 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 SCNN1AP37088 669 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 SGO2Q562F6 1265 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 ERICH1Q86X53 443 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 SDCBP2Q9H190 292 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 NXF1Q9UBU9 619 aaKnown RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 GIT1Q9Y2X7 761 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 TMEM191CA6NGB0 347 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 ZNF623O75123 536 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 CSDE1O75534 798 aaKnown RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 PRKAR2AP13861 404 aaKnown RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 PTPN7P35236 360 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 MAGOHP61326 146 aaKnown RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 ADCY2Q08462 1091 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 FRMPD3Q5JV73 1810 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 C6orf118Q5T5N4 469 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 DENND2CQ68D51 928 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 RHBDF2Q6PJF5 856 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 PAXIP1Q6ZW49 1069 aaPredicted RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 RHOT1Q8IXI2 618 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 KATNAL2Q8IYT4 538 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 TMEM40Q8WWA1 233 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 BTBD6Q96KE9 485 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 PPP1R16BQ96T49 567 aa15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 ROPN1BQ9BZX4 212 aaPredicted RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 ROPN1Q9HAT0 212 aaPredicted RBP15.47■□□□□ 0.07
SPOCK3-226ENST00000541354 ECM2O94769 699 aaPredicted RBP15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 CD58P19256 250 aa15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 COPS2P61201 443 aa15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 GDF6Q6KF10 455 aaPredicted RBP15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 TRMT10CQ7L0Y3 403 aaKnown RBP15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 CPNE8Q86YQ8 564 aa15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 TOP6BLQ8N6T0 577 aa15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 ELOVL4Q9GZR5 314 aa15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 CHORDC1Q9UHD1 332 aaPredicted RBP15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 IPPQ9Y573 584 aa15.46■□□□□ 0.07
SPOCK3-226ENST00000541354 TRIP12Q14669 1992 aaPredicted RBP15.46■□□□□ 0.06
SPOCK3-226ENST00000541354 SMIM28A0A1B0GU29 152 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms