RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 C18orf8Q96DM3 657 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 CPXM1Q96SM3 734 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 CARD9Q9H257 536 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 GDAP2Q9NXN4 497 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 HESX1Q9UBX0 185 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 IP6K2Q9UHH9 426 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 KIAA1257Q9ULG3 409 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 STRIP2Q9ULQ0 834 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 PCDHA3Q9Y5H8 950 aa10.09□□□□□ -0.79
PAAF1-209ENST00000540659 TANC1Q9C0D5 1861 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 A0A0U1RQF3 1178 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TCRBV5S1A1TA0A578 114 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 CARNS1A5YM72 827 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TMEM191CA6NGB0 347 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TULP2O00295 520 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 PYGMP11217 842 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 SLC1A1P43005 524 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 PEX5P50542 639 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TAS2R40P59535 323 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 OGDHQ02218 1023 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 ITIH3Q06033 890 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 LLGL1Q15334 1064 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 STILQ15468 1287 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 KCTD19Q17RG1 926 aaPredicted RBP10.08□□□□□ -0.8
PAAF1-209ENST00000540659 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 PRPF38BQ5VTL8 546 aaKnown RBP10.08□□□□□ -0.8
PAAF1-209ENST00000540659 CC2D1AQ6P1N0 951 aaPredicted RBP10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TRAF7Q6Q0C0 670 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 LCLAT1Q6UWP7 414 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 FAM183BPQ6ZVS7 135 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 LRRC8DQ7L1W4 858 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 UNC93AQ86WB7 457 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TTC30AQ86WT1 665 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 ECHDC2Q86YB7 292 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 CCDC50Q8IVM0 306 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TOP6BLQ8N6T0 577 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 EMC1Q8N766 993 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 C3orf20Q8ND61 904 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 C3orf58Q8NDZ4 430 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 HASPINQ8TF76 798 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 HDAC7Q8WUI4 952 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 SENP8Q96LD8 212 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 PAAF1Q9BRP4 392 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 FTHL17Q9BXU8 183 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 RGS18Q9NS28 235 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 KLHL11Q9NVR0 708 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 PCDH10Q9P2E7 1040 aa10.08□□□□□ -0.8
PAAF1-209ENST00000540659 TIMM13Q9Y5L4 95 aaPredicted RBP10.08□□□□□ -0.8
PAAF1-209ENST00000540659 SCN5AQ14524 2016 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 RANBP2P49792 3224 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 ARHGEF37A1IGU5 675 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 TARSL2A2RTX5 802 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 DCDC2CA8MYV0 355 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 E5RJQ4 531 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 H0YGN5 161 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 I3L4J1 428 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 RAD51CO43502 376 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 PQBP1O60828 265 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 ZNF623O75123 536 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 ATP2C2O75185 946 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 ERLIN1O75477 346 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 HEXIM1O94992 359 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 PFKMP08237 780 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 KRT3P12035 628 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 SELPP16109 830 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 WARSP23381 471 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 PSMA2P25787 234 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 TAP1Q03518 808 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 ZNF252P-AS1Q0IIN9 211 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 BRD3Q15059 726 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 TRIM60Q495X7 471 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 PPP1R15BQ5SWA1 713 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 FAM102AQ5T9C2 384 aaPredicted RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 WSCD1Q658N2 575 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 SLC39A5Q6ZMH5 540 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 RTN4RL1Q86UN2 441 aaPredicted RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 RHOT1Q8IXI2 618 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 FAM126BQ8IXS8 530 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 LINC01599Q8WXQ3 324 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 MED10Q9BTT4 135 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 MIS12Q9H081 205 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 DDX47Q9H0S4 455 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 WDR35Q9P2L0 1181 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 DMGDHQ9UI17 866 aaKnown RBP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 TMEM59LQ9UK28 342 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 RAB21Q9UL25 225 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 ATP11BQ9Y2G3 1177 aa10.07□□□□□ -0.8
PAAF1-209ENST00000540659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.07□□□□□ -0.8
PAAF1-209ENST00000540659 GOLGA6L10A0A0M3HER8 536 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 SIGLEC16A6NMB1 481 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 F8VP50 259 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 CCDC188H7C350 402 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 GRAP2O75791 330 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 LCP1P13796 627 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 TCF4P15884 667 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 MCM3P25205 808 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 MAN1A1P33908 653 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 RFC1P35251 1148 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms