RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CCDC26Q8TAB7 109 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 CEP295NLQ96MC4 621 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 SYT15Q9BQS2 421 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 GKN1Q9NS71 199 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 RBM12Q9NTZ6 932 aaKnown RBP16.39■□□□□ 0.21
UBE3B-211ENST00000539843 TMLHEQ9NVH6 421 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 MAGEC2Q9UBF1 373 aaPredicted RBP16.39■□□□□ 0.21
UBE3B-211ENST00000539843 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 CDH9Q9ULB4 789 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 SPTBN4Q9H254 2564 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 TCHHQ07283 1943 aa16.39■□□□□ 0.21
UBE3B-211ENST00000539843 SCN1AP35498 2009 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 NUP210Q8TEM1 1887 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-211ENST00000539843 A0A087X0B3 334 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 NOL4O94818 638 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 RETP07949 1114 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 DLATP10515 647 aaKnown RBP16.38■□□□□ 0.21
UBE3B-211ENST00000539843 CYP2F1P24903 491 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 IFNAR2P48551 515 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 TNNC1P63316 161 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 FAM160A1Q05DH4 1040 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 TNK2Q07912 1038 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 NR1H3Q13133 447 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 TRPC3Q13507 836 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 RSPO4Q2I0M5 234 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-211ENST00000539843 LMBRD2Q68DH5 695 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-211ENST00000539843 TXNDC8Q6A555 127 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 VSTM1Q6UX27 236 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 TTC16Q8NEE8 873 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 ZSWIM2Q8NEG5 633 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 USP13Q92995 863 aaPredicted RBP16.38■□□□□ 0.21
UBE3B-211ENST00000539843 SNX25Q9H3E2 840 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 CGNQ9P2M7 1197 aaKnown RBP16.38■□□□□ 0.21
UBE3B-211ENST00000539843 TFIP11Q9UBB9 837 aaKnown RBP16.38■□□□□ 0.21
UBE3B-211ENST00000539843 SLC8A2Q9UPR5 921 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 DMDP11532 3685 aa16.38■□□□□ 0.21
UBE3B-211ENST00000539843 OTOGLQ3ZCN5 2332 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 ANK1P16157 1881 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 COL4A2P08572 1712 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 CHURC1-FNTBB4DL54 471 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 GABRDO14764 452 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 TRIM66O15016 1216 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 LRP3O75074 770 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 TDGF1P13385 188 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 GRIK1P39086 918 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 MAGEA11P43364 429 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 ME1P48163 572 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 FNTBP49356 437 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 GPR15P49685 360 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 WNT7BP56706 349 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 CCINQ13939 588 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 MTF1Q14872 753 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 SNRNP35Q16560 246 aaKnown RBP16.37■□□□□ 0.21
UBE3B-211ENST00000539843 LPAL2Q16609 132 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 SOWAHAQ2M3V2 549 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 FBXO43Q4G163 708 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 SDHAF4Q5VUM1 108 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 ATL3Q6DD88 541 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 TXNDC11Q6PKC3 985 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 Q6ZS52 159 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 UNC13DQ70J99 1090 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 XXYLT1Q8NBI6 393 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 ATP2A3Q93084 1043 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 MYRFLQ96LU7 910 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 LRRC3BQ96PB8 259 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 C7orf25Q9BPX7 421 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 FAM83CQ9BQN1 747 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 FGFBP2Q9BYJ0 223 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 EBF3Q9H4W6 596 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 SIX4Q9UIU6 781 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 CFAP45Q9UL16 551 aa16.37■□□□□ 0.21
UBE3B-211ENST00000539843 CFAP54Q96N23 3096 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 PFKLP17858 780 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 DRD1P21728 446 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 WARSP23381 471 aaKnown RBP16.36■□□□□ 0.21
UBE3B-211ENST00000539843 HOXA6P31267 233 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 CYP2J2P51589 502 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 CYP27A1Q02318 531 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 E2F4Q16254 413 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 HEATR6Q6AI08 1181 aaKnown RBP16.36■□□□□ 0.21
UBE3B-211ENST00000539843 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 TMEM150AQ86TG1 271 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 RDH13Q8NBN7 331 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 GOLGA5Q8TBA6 731 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 SNX21Q969T3 373 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 CGRRF1Q99675 332 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 AGPAT3Q9NRZ7 376 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 DUS2Q9NX74 493 aaKnown RBP16.36■□□□□ 0.21
UBE3B-211ENST00000539843 DLL3Q9NYJ7 618 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 CCL26Q9Y258 94 aa16.36■□□□□ 0.21
UBE3B-211ENST00000539843 TRDMT1O14717 391 aaKnown RBP16.35■□□□□ 0.21
UBE3B-211ENST00000539843 POLR2DO15514 142 aaKnown RBP16.35■□□□□ 0.21
UBE3B-211ENST00000539843 PHACTR2O75167 634 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 TRIM21P19474 475 aaKnown RBP16.35■□□□□ 0.21
UBE3B-211ENST00000539843 PPP3CCP48454 512 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms