RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 LRRC52Q8N7C0 313 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 LRRC45Q96CN5 670 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 CALR3Q96L12 384 aaKnown RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 MRPL45Q9BRJ2 306 aaKnown RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 TSEN34Q9BSV6 310 aaKnown RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 ERVK-5Q9HDB9 667 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 AVENQ9NQS1 362 aaPredicted RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 CEP83Q9Y592 693 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 E7EVH7 732 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 PGRMC1O00264 195 aaKnown RBP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 MGEA5O60502 916 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 MYBL1P10243 752 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 PRMT2P55345 433 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 INCA1Q0VD86 236 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 DDX42Q86XP3 938 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 TRIM11Q96F44 468 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 AP1M1Q9BXS5 423 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 GGA2Q9UJY4 613 aa18.05■□□□□ 0.48
PCDHB17P-201ENST00000539533 BHMG1C9JSJ3 638 aaPredicted RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 SART1O43290 800 aaKnown RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 CD4P01730 458 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 MMP8P22894 467 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 DPH6Q7L8W6 267 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 TMEM35BQ8NCS4 154 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 GSTCDQ8NEC7 633 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 OR2W6PQ8NHA6 318 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 VCPIP1Q96JH7 1222 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 HEXIM2Q96MH2 286 aaKnown RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 STARD7Q9NQZ5 370 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 ANAPC7Q9UJX3 599 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 SPTLC1O15269 473 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 GJB6O95452 261 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 LSM8O95777 96 aaKnown RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 ITGA4P13612 1032 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 IBSPP21815 317 aaPredicted RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 CTNNA1P35221 906 aaKnown RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 MLH1P40692 756 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 C1QBPQ07021 282 aaKnown RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 ZNF844Q08AG5 666 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 RNF187Q5TA31 235 aaPredicted RBP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 GAD1Q99259 594 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 NEUROG2Q9H2A3 272 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 DONSONQ9NYP3 566 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 NME7Q9Y5B8 376 aa18.04■□□□□ 0.48
PCDHB17P-201ENST00000539533 CDH5P33151 784 aaPredicted RBP18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 MARCKSL1P49006 195 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 MAMLD1Q13495 774 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 LIN9Q5TKA1 542 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 DCAF12L1Q5VU92 463 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 SMYD5Q6GMV2 418 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 ALG3Q92685 438 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 KRT35Q92764 455 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 PPP1R10Q96QC0 940 aaKnown RBP18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 DDX47Q9H0S4 455 aaKnown RBP18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 PPANQ9NQ55 473 aaKnown RBP18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 MIOSQ9NXC5 875 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 CACNG4Q9UBN1 327 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 CYTH4Q9UIA0 394 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 MED7O43513 233 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 XPOTO43592 962 aaKnown RBP18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 IGFBP6P24592 240 aaPredicted RBP18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 SOWAHAQ2M3V2 549 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 FAM26DQ5JW98 314 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 AGMOQ6ZNB7 445 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 C12orf29Q8N999 325 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 RPS6KC1Q96S38 1066 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 NT5C1AQ9BXI3 368 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 ZNF518BQ9C0D4 1074 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 UNC93B1Q9H1C4 597 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 SLC12A6Q9UHW9 1150 aa18.03■□□□□ 0.48
PCDHB17P-201ENST00000539533 KPNA7A9QM74 516 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 KRIT1O00522 736 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 CKBP12277 381 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 IFT88Q13099 833 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 PLEKHA7Q6IQ23 1121 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 SLC43A3Q8NBI5 491 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 TSPAN18Q96SJ8 248 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 SUFUQ9UMX1 484 aa18.02■□□□□ 0.48
PCDHB17P-201ENST00000539533 FRMPD3Q5JV73 1810 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 CCDC188H7C350 402 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 HCRTO43612 131 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 VDRP11473 427 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 ATF7P17544 494 aaPredicted RBP18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 CYP3A5P20815 502 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 PPP1R2P3Q6NXS1 205 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 C6orf89Q6UWU4 347 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 ERICH1Q86X53 443 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 RNF169Q8NCN4 708 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 CD101Q93033 1021 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 LHX5Q9H2C1 402 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 TJP2Q9UDY2 1190 aa18.02■□□□□ 0.47
PCDHB17P-201ENST00000539533 O00370 1275 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 SPOPO43791 374 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 MICAL2O94851 1124 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 ACTN3Q08043 901 aaPredicted RBP18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 MTMR3Q13615 1198 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 DSC3Q14574 896 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 SGO2Q562F6 1265 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms