RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CPT1BQ92523 772 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 NKD2Q969F2 451 aaPredicted RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 TTC25Q96NG3 672 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 MRPL4Q9BYD3 311 aaKnown RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 XYLT2Q9H1B5 865 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 NRBP2Q9NSY0 501 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 BTBD7Q9P203 1132 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 HMGXB4Q9UGU5 601 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 PIK3R2O00459 728 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 ABLIM1O14639 778 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 MAFO75444 373 aaPredicted RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 CSDE1O75534 798 aaKnown RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 PRKCBP05771 671 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 KRT3P12035 628 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 TARSP26639 723 aaKnown RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 MSH2P43246 934 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 RIPK1Q13546 671 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 SPARCL1Q14515 664 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 SGSM1Q2NKQ1 1148 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 UNC45BQ8IWX7 931 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 UTP4Q969X6 686 aaKnown RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 CPXM1Q96SM3 734 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 FOXP3Q9BZS1 431 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 PCDH9Q9HC56 1237 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 HOXC10Q9NYD6 342 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 RABGEF1Q9UJ41 708 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 CPSF3Q9UKF6 684 aaKnown RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 SOWAHBA6NEL2 793 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 OGTO15294 1046 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 PRPF4O43172 522 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 ARIH2O95376 493 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 ANP32DO95626 131 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 RFC5P40937 340 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 PSMC1P62191 440 aaKnown RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 LACTBP83111 547 aaPredicted RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 EEF1DP3Q658K8 133 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 LVRNQ6Q4G3 990 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 ZPBP2Q6X784 338 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 TDRPQ86YL5 185 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 TRPM4Q8TD43 1214 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 TWNKQ96RR1 684 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 ALG13Q9NP73 1137 aaKnown RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 METTL5Q9NRN9 209 aaKnown RBP12.57□□□□□ -0.4
CPNE8-203ENST00000538596 HAO1Q9UJM8 370 aa12.57□□□□□ -0.4
CPNE8-203ENST00000538596 TYROBPO43914 113 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 TMEM63AO94886 807 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 UNC5CO95185 931 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 EIF4BP23588 611 aaKnown RBP12.56□□□□□ -0.4
CPNE8-203ENST00000538596 RPL22P35268 128 aaKnown RBP12.56□□□□□ -0.4
CPNE8-203ENST00000538596 RNASELQ05823 741 aaKnown RBP12.56□□□□□ -0.4
CPNE8-203ENST00000538596 MOGSQ13724 837 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 HSDL1Q3SXM5 330 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 DPH6Q7L8W6 267 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 FAM71DQ8N9W8 422 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 PYROXD1Q8WU10 500 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 HSPH1Q92598 858 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 NLRP4Q96MN2 994 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 GEMIN8Q9NWZ8 242 aaKnown RBP12.56□□□□□ -0.4
CPNE8-203ENST00000538596 DDX56Q9NY93 547 aaKnown RBP12.56□□□□□ -0.4
CPNE8-203ENST00000538596 SHOC2Q9UQ13 582 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 ERBB2P04626 1255 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 CXCL8P10145 99 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 CCNB1P14635 433 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 KDELR1P24390 212 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 ADRA1DP25100 572 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 ELF1P32519 619 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 ACVR2BQ13705 512 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 PDK4Q16654 411 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 SH3PXD2AQ5TCZ1 1133 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 NPNTQ6UXI9 565 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 FBXO36Q8NEA4 188 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 DNERQ8NFT8 737 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 FBF1Q8TES7 1133 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 NSMCE1Q8WV22 266 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 KCNN1Q92952 543 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
CPNE8-203ENST00000538596 PPP1R16BQ96T49 567 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 SDCBP2Q9H190 292 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 PSMC3IPQ9P2W1 217 aaPredicted RBP12.56□□□□□ -0.4
CPNE8-203ENST00000538596 STARD13Q9Y3M8 1113 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 NUMBLQ9Y6R0 609 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 KAT6AQ92794 2004 aa12.56□□□□□ -0.4
CPNE8-203ENST00000538596 ZBTB42B2RXF5 422 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 MAGEB2O15479 319 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 EDF1O60869 148 aaKnown RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 ALADP13716 330 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 RPS12P25398 132 aaKnown RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 GEMIN4P57678 1058 aaKnown RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 NR1H3Q13133 447 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 MMRN1Q13201 1228 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 MAPK6Q16659 721 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms