RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 KCND2Q9NZV8 630 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 TRIM10Q9UDY6 481 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 V9GYQ6 96 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 A0A1W2PQJ5 194 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 COMTP21964 271 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ATP1A4Q13733 1029 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 MAPRE1Q15691 268 aaKnown RBP10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ARHGAP17Q68EM7 881 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ECSITQ9BQ95 431 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 PSMD14O00487 310 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 ATP6V1G2O95670 118 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 SGO1Q5FBB7 561 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 XKR3Q5GH77 459 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 TCAIMQ8N3R3 496 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 BTBD7Q9P203 1132 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 TET3O43151 1660 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 MAP3K4Q9Y6R4 1608 aa10.34□□□□□ -0.75
COL4A6-208ENST00000538570 IL18RAPO95256 599 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 TMEM253P0C7T8 217 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 GPD1P21695 349 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 PSMA4P25789 261 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 GUCY1A2P33402 732 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 IPMKQ8NFU5 416 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 WDR48Q8TAF3 677 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ERP44Q9BS26 406 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 APOL5Q9BWW9 433 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 IMPAD1Q9NX62 359 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 HERC5Q9UII4 1024 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 PNPLA7Q6ZV29 1317 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 TADA2AO75478 443 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 PGK2P07205 417 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 PUDPQ08623 228 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 KRR1Q13601 381 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ADRM1Q16186 407 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 BARGINQ6ZT62 677 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 CHMP1BQ7LBR1 199 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 MIEF2Q96C03 454 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 KLF6Q99612 283 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 FHOD1Q9Y613 1164 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 POLRMTO00411 1230 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 CD4P01730 458 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 GYS1P13807 737 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 POU4F1Q01851 419 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 TRIM71Q2Q1W2 868 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 BRINP3Q76B58 766 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 AHI1Q8N157 1196 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 MTERF3Q96E29 417 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 PHF20Q9BVI0 1012 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 CFAP99D6REC4 459 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 UBXN8O00124 270 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 H2AFYO75367 372 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 TXNP10599 105 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 TARSP26639 723 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 SOX6P35712 828 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 KRT20P35900 424 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 NUDT2P50583 147 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 DCTN2Q13561 401 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 SH3BP5LQ7L8J4 393 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 USP38Q8NB14 1042 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 TMEM143Q96AN5 459 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 DCDC2Q9UHG0 476 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 NARFQ9UHQ1 456 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 KLHL20Q9Y2M5 609 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 LOC100653049A0A140TA62 436 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 MTSS1O43312 755 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 KRT34O76011 436 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 VIL1P09327 827 aaKnown RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 MYBP10242 640 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 AKR1B1P15121 316 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 MTTPP55157 894 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 PLEKHA7Q6IQ23 1121 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ZNF677Q86XU0 584 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ZNF786Q8N393 782 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 SERPINB12Q96P63 405 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ATP6V1HQ9UI12 483 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 PRG3Q9Y2Y8 225 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ZNF839A8K0R7 811 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ZBTB39O15060 712 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ABL2P42684 1182 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 CPA2P48052 419 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 STX5Q13190 355 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 ZRANB3Q5FWF4 1079 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 NAPEPLDQ6IQ20 393 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL4A6-208ENST00000538570 SLC7A14Q8TBB6 771 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 MAML3Q96JK9 1138 aa10.33□□□□□ -0.76
COL4A6-208ENST00000538570 COL15A1P39059 1388 aa10.32□□□□□ -0.76
COL4A6-208ENST00000538570 ADCY10Q96PN6 1610 aa10.32□□□□□ -0.76
COL4A6-208ENST00000538570 SOAT2O75908 522 aa10.32□□□□□ -0.76
COL4A6-208ENST00000538570 PDGFRBP09619 1106 aa10.32□□□□□ -0.76
COL4A6-208ENST00000538570 FXR1P51114 621 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL4A6-208ENST00000538570 SLC20A2Q08357 652 aa10.32□□□□□ -0.76
COL4A6-208ENST00000538570 TWF1Q12792 350 aa10.32□□□□□ -0.76
COL4A6-208ENST00000538570 C16orf72Q14CZ0 275 aa10.32□□□□□ -0.76
COL4A6-208ENST00000538570 HIST2H2ACQ16777 129 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-208ENST00000538570 RSBN1Q5VWQ0 802 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms