RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CCDC130P13994 396 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DESP17661 470 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CHRNB2P17787 502 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DNAJB2P25686 324 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GLUD2P49448 558 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 VAV2P52735 878 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ZNF132P52740 706 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 RABGGTBP53611 331 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GPC5P78333 572 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PSMD5Q16401 504 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 NFE2Q16621 373 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 INTS6LQ5JSJ4 861 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PPP1R26Q5T8A7 1209 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DENND1BQ6P3S1 775 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LCLAT1Q6UWP7 414 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CCAR2Q8N163 923 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SLC39A11Q8N1S5 342 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 C12orf29Q8N999 325 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SLC30A5Q8TAD4 765 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LNX1Q8TBB1 728 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 KIAA1524Q8TCG1 905 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TFAP2BQ92481 460 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GPR62Q9BZJ7 368 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MRPL17Q9NRX2 175 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ADAM22Q9P0K1 906 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TSPAN16Q9UKR8 245 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 KIAA1671Q9BY89 1806 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 H0YGN5 161 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GABRDO14764 452 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 HCRTO43612 131 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 AP1G2O75843 785 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FGF18O76093 207 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CSPG5O95196 566 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FGFR3P22607 806 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ELF1P32519 619 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GRIK1P39086 918 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CDR1P51861 262 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 BCAT1P54687 386 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GALCP54803 685 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 HTRA4P83105 476 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CREMQ03060 361 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PTPN14Q15678 1187 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ARHGAP17Q68EM7 881 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DDX53Q86TM3 631 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SCN4BQ8IWT1 228 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 VPS52Q8N1B4 723 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 C17orf53Q8N3J3 647 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 C1orf131Q8NDD1 294 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SECISBP2LQ93073 1101 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 B3GALT6Q96L58 329 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ALS2CR12Q96Q35 445 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PCDHB18PQ96TA0 734 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LPIN3Q9BQK8 851 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 C11orf70Q9BRQ4 267 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LHX5Q9H2C1 402 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ENTPD7Q9NQZ7 604 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MARCH5Q9NX47 278 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MTUS1Q9ULD2 1270 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 INTUQ9ULD6 942 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 STRIP2Q9ULQ0 834 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PCDHGC3Q9UN70 934 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MACROD2A1Z1Q3 448 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MYBPHLA2RUH7 354 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GRXCR1A8MXD5 290 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 GOLGA8SH3BPF8 625 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 O00370 1275 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CLDN5O00501 218 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 OAZ2O95190 189 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 CXCL14O95715 111 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SOD2P04179 222 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TMEM253P0C7T8 217 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 MYBL1P10243 752 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 BMPR1AP36894 532 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ACADSBP45954 432 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RGS7P49802 495 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 SMC1AQ14683 1233 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 RAB30Q15771 203 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 TAF12Q16514 161 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 ASTE1Q2TB18 679 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 DCUN1D2Q6PH85 259 aa11.27□□□□□ -0.61
TNFRSF1A-211ENST00000538363 PRSS55Q6UWB4 352 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms