RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 AMHR2Q16671 573 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 PHKG1Q16816 387 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 FAM83EQ2M2I3 478 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 MPZL3Q6UWV2 235 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 MIB1Q86YT6 1006 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 DAGLBQ8NCG7 672 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 CMTM5Q96DZ9 223 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 SPACA6W5XKT8 324 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 GOLGA8TH3BQL2 631 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 VWA5AO00534 786 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 APOA1P02647 267 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
SCARB1-205ENST00000538291 C11orf96Q7Z7L8 435 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 SYN2Q92777 582 aaPredicted RBP17.48■□□□□ 0.39
SCARB1-205ENST00000538291 NMRK1Q9NWW6 199 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 DSEQ9UL01 958 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 ZDHHC9Q9Y397 364 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 CDY2AQ9Y6F7 541 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 CDY1Q9Y6F8 540 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 PTPN7P35236 360 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 CTXN3Q4LDR2 81 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 GTF3C4Q9UKN8 822 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 VDRP11473 427 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 CHN1P15882 459 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 GARTP22102 1010 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 EPHX2P34913 555 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 CLCN3P51790 818 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 AASDHQ4L235 1098 aaPredicted RBP17.48■□□□□ 0.39
SCARB1-205ENST00000538291 RBBP8Q99708 897 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 C17orf80Q9BSJ5 609 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 CHST12Q9NRB3 414 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 CYB561D2O14569 222 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 PPP1R37O75864 691 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 STIP1P31948 543 aaKnown RBP17.48■□□□□ 0.39
SCARB1-205ENST00000538291 E2F4Q16254 413 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 ACAD10Q6JQN1 1059 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 ERAP2Q6P179 960 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 BLOC1S5Q8TDH9 187 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 TADA1Q96BN2 335 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 PRMT6Q96LA8 375 aaPredicted RBP17.48■□□□□ 0.39
SCARB1-205ENST00000538291 DPP7Q9UHL4 492 aa17.48■□□□□ 0.39
SCARB1-205ENST00000538291 E2F8A0AVK6 867 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 TBC1D4O60343 1298 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 MDH1P40925 334 aaKnown RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 ITGA8P53708 1063 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 CSE1LP55060 971 aaKnown RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 CNGA3Q16281 694 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 KHDRBS2Q5VWX1 349 aaKnown RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 USP49Q70CQ1 688 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 ACER1Q8TDN7 264 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 EMILIN2Q9BXX0 1053 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 DBR1Q9UK59 544 aaKnown RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 DDHD2O94830 711 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 TNIP2Q8NFZ5 429 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 ROPN1BQ9BZX4 212 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 ROPN1Q9HAT0 212 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 BLOC1S6Q9UL45 172 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 MYO1CO00159 1063 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 ZC3H11AO75152 810 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 NCKAP1LP55160 1127 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 POTEAQ6S8J7 498 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 SETD3Q86TU7 594 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 RIBC1Q8N443 379 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 NDEL1Q9GZM8 345 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 STARD7Q9NQZ5 370 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 KPNA6O60684 536 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 GSNP06396 782 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 VCLP18206 1134 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 SLC26A2P50443 739 aa17.47■□□□□ 0.39
SCARB1-205ENST00000538291 RIN2Q8WYP3 895 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-205ENST00000538291 GUCA1CO95843 209 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 VCAM1P19320 739 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 CARSP49589 748 aaKnown RBP17.46■□□□□ 0.39
SCARB1-205ENST00000538291 OXCT1P55809 520 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 CYTH1Q15438 398 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 KYNUQ16719 465 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 TIGD7Q6NT04 549 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-205ENST00000538291 MOXD1Q6UVY6 613 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 HORMAD1Q86X24 394 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 IRX2Q9BZI1 471 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-205ENST00000538291 RNF17Q9BXT8 1623 aaKnown RBP17.46■□□□□ 0.39
SCARB1-205ENST00000538291 PLEKHM3Q6ZWE6 761 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 ACOT1Q86TX2 421 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 PARP9Q8IXQ6 854 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 ZDHHC15Q96MV8 337 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 AAR2Q9Y312 384 aaKnown RBP17.46■□□□□ 0.39
SCARB1-205ENST00000538291 SEZ6Q53EL9 994 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 FBXO16Q8IX29 292 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-205ENST00000538291 ADGRF2Q8IZF7 708 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 DNAJC7Q99615 494 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 RUSC1Q9BVN2 902 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 OSBPL1AQ9BXW6 950 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 SENP2Q9HC62 589 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 NMRK2Q9NPI5 230 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 PPP2R3BQ9Y5P8 575 aa17.46■□□□□ 0.39
SCARB1-205ENST00000538291 AIM2O14862 343 aa17.46■□□□□ 0.38
SCARB1-205ENST00000538291 EPHB3P54753 998 aa17.46■□□□□ 0.38
SCARB1-205ENST00000538291 MTO1Q9Y2Z2 717 aaKnown RBP17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms