RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 NT5DC4Q86YG4 428 aa18.42■□□□□ 0.54
SNX17-210ENST00000537606 ARFGAP1Q8N6T3 406 aa18.42■□□□□ 0.54
SNX17-210ENST00000537606 NT5C1AQ9BXI3 368 aa18.42■□□□□ 0.54
SNX17-210ENST00000537606 FAM49BQ9NUQ9 324 aa18.42■□□□□ 0.54
SNX17-210ENST00000537606 PASKQ96RG2 1323 aa18.42■□□□□ 0.54
SNX17-210ENST00000537606 HMGB1P1B2RPK0 211 aaPredicted RBP18.41■□□□□ 0.54
SNX17-210ENST00000537606 TULP2O00295 520 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 PSMC4P43686 418 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 RGS7P49802 495 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 INCA1Q0VD86 236 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 PIGHQ14442 188 aaPredicted RBP18.41■□□□□ 0.54
SNX17-210ENST00000537606 KRT71Q3SY84 523 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 PAXIP1Q6ZW49 1069 aaPredicted RBP18.41■□□□□ 0.54
SNX17-210ENST00000537606 FAXDC2Q96IV6 333 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 SLITRK1Q96PX8 696 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 ASIC3Q9UHC3 531 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 LRRD1A4D1F6 860 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 ANKRD65E5RJM6 399 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 IVLP07476 585 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 AKR1A1P14550 325 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 PMS2P54278 862 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 INHBEP58166 350 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 TRIM32Q13049 653 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 ODF2Q5BJF6 829 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 PPP1R26Q5T8A7 1209 aaPredicted RBP18.41■□□□□ 0.54
SNX17-210ENST00000537606 ALKAL1Q6UXT8 129 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 BEST2Q8NFU1 509 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 BCAS4Q8TDM0 211 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 HAUS1Q96CS2 278 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 PIWIL1Q96J94 861 aaKnown RBP18.41■□□□□ 0.54
SNX17-210ENST00000537606 SEMA4AQ9H3S1 761 aa18.41■□□□□ 0.54
SNX17-210ENST00000537606 SMIM28A0A1B0GU29 152 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 IGHA2P01877 340 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 HMGCRP04035 888 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 IL1R2P27930 398 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 TAP1Q03518 808 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 IFFO1Q0D2I5 559 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 UBXN11Q5T124 520 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 C9orf57Q5W0N0 161 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 APBB1IPQ7Z5R6 666 aaPredicted RBP18.4■□□□□ 0.54
SNX17-210ENST00000537606 MAIP1Q8WWC4 291 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 CWC15Q9P013 229 aaKnown RBP18.4■□□□□ 0.54
SNX17-210ENST00000537606 PCSK1NQ9UHG2 260 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 NOVA2Q9UNW9 492 aaKnown RBP18.4■□□□□ 0.54
SNX17-210ENST00000537606 GRAP2O75791 330 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 IRF5Q13568 498 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 GOLGA7BQ2TAP0 167 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 FAM102AQ5T9C2 384 aaPredicted RBP18.4■□□□□ 0.54
SNX17-210ENST00000537606 CCDC25Q86WR0 208 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 RCOR2Q8IZ40 523 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 ARRDC4Q8NCT1 418 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 OR6B3Q8NGW1 331 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 TRIB2Q92519 343 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 RUNDC3BQ96NL0 473 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 KATNAL1Q9BW62 490 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 DPEP3Q9H4B8 488 aa18.4■□□□□ 0.54
SNX17-210ENST00000537606 SMIM23A6NLE4 172 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 LRCH4O75427 683 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 STAU1O95793 577 aaKnown RBP18.39■□□□□ 0.53
SNX17-210ENST00000537606 PFKMP08237 780 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 PDGFRBP09619 1106 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 CCT5P48643 541 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 CNTN3Q9P232 1028 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 Q9Y3F1 56 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 E5RJQ4 531 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 SPTLC1O15269 473 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 CRYBB1P53674 252 aaPredicted RBP18.39■□□□□ 0.53
SNX17-210ENST00000537606 SOX4Q06945 474 aaPredicted RBP18.39■□□□□ 0.53
SNX17-210ENST00000537606 PDE4CQ08493 712 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 SLC29A2Q14542 456 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 SOWAHAQ2M3V2 549 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 RAB6CQ53S08 254 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 ZNF618Q5T7W0 954 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 SH3PXD2AQ5TCZ1 1133 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 SPOCD1Q6ZMY3 1216 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 ATL2Q8NHH9 583 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 RAB6CQ9H0N0 254 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 DERAQ9Y315 318 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 IPPQ9Y573 584 aa18.39■□□□□ 0.53
SNX17-210ENST00000537606 TP73O15350 636 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 CTSHP09668 335 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 FLT3LGP49771 235 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 ZNF268Q14587 947 aaPredicted RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 TAF5Q15542 800 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 FAM47CQ5HY64 1035 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 TWF2Q6IBS0 349 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 OR6B2Q6IFH4 312 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 LCLAT1Q6UWP7 414 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 ART4Q93070 314 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 WNT8BQ93098 351 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 RBM41Q96IZ5 413 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 PABPC3Q9H361 631 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 DNAJC17Q9NVM6 304 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 SAE1Q9UBE0 346 aaPredicted RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 CAND2O75155 1236 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 DUSP11O75319 330 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 IGFBP6P24592 240 aaPredicted RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 MAGOHP61326 146 aaKnown RBP18.38■□□□□ 0.53
SNX17-210ENST00000537606 DYNLT1P63172 113 aa18.38■□□□□ 0.53
SNX17-210ENST00000537606 SREBF2Q12772 1141 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms