RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TRIM59Q8IWR1 403 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CPSF7Q8N684 471 aaKnown RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 C12orf50Q8NA57 414 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 MINDY2Q8NBR6 621 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 PRR11Q96HE9 360 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SNX25Q9H3E2 840 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SEPT3Q9UH03 358 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 UNCXA6NJT0 531 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 PSMD12O00232 456 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 RGS13O14921 159 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CIAO1O76071 339 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 KRT6AP02538 564 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 KRT6BP04259 564 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 PCCAP05165 728 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 FYNP06241 537 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SLC16A2P36021 539 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 THOP1P52888 689 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ATP6V0D1P61421 351 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CD300CQ08708 224 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 PTK2BQ14289 1009 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 Q3C1V9 767 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 GIMAP1Q8WWP7 306 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ATL1Q8WXF7 558 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 LRGUKQ96M69 825 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 NLRP4Q96MN2 994 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 FOXP3Q9BZS1 431 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 RNF41Q9H4P4 317 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 LRRC19Q9H756 370 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CAAP1Q9H8G2 361 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 AASDHPPTQ9NRN7 309 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 KCNK4Q9NYG8 393 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SLC30A1Q9Y6M5 507 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ATRNO75882 1429 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 CYP26A1O43174 497 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 GMNNO75496 209 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 RSL1D1O76021 490 aaKnown RBP8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 CALM1P0DP23 149 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 CALM2P0DP24 149 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 CALM3P0DP25 149 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 FGFR1P11362 822 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 PSMC3P17980 439 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ETV3P41162 512 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 KCNJ1P48048 391 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 IREB2P48200 963 aaKnown RBP8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ITGA8P53708 1063 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 PRKG1Q13976 671 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ISLR2Q6UXK2 745 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 CLVS1Q8IUQ0 354 aaPredicted RBP8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 MYO1HQ8N1T3 1032 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 TBC1D15Q8TC07 691 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 PSPC1Q8WXF1 523 aaKnown RBP8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ISOC1Q96CN7 298 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 CALML4Q96GE6 196 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ZNF496Q96IT1 587 aaPredicted RBP8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 DCUN1D5Q9BTE7 237 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 PPARGC1AQ9UBK2 798 aaKnown RBP8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 PSMD13Q9UNM6 376 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 DNAJC16Q9Y2G8 782 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 AP4S1Q9Y587 144 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ANGPTL3Q9Y5C1 460 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ALG6Q9Y672 507 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 ACEP12821 1306 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 EMSYQ7Z589 1322 aa8.9□□□□□ -0.98
SRGAP1-202ENST00000537556 TNRQ92752 1358 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 LTBP4Q8N2S1 1624 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 hCG_1642624A0A1W2PR95 340 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 WDR91A4D1P6 747 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 SORBS3O60504 671 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 UFL1O94874 794 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 ADAMTS2O95450 1211 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 IL1BP01584 269 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 ABCB1P08183 1280 aaPredicted RBP8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 INHBBP09529 407 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 ATF2P15336 505 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 RPA1P27694 616 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 IFNA8P32881 189 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC1A1P43005 524 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 FUT2Q10981 343 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 CCNIQ14094 377 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 PKN2Q16513 984 aaKnown RBP8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 ANKRD13DQ6ZTN6 518 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 SLC13A5Q86YT5 568 aaPredicted RBP8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 IFNL3Q8IZI9 196 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 PQLC1Q8N2U9 271 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 ADCY4Q8NFM4 1077 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 FBXO27Q8NI29 283 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 OSCP1Q8WVF1 389 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 ALKBH8Q96BT7 664 aaKnown RBP8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 ZSWIM1Q9BR11 485 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 WWP1Q9H0M0 922 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 SORCS3Q9UPU3 1222 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 GNEQ9Y223 722 aaKnown RBP8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 SPATA31A3Q5VYP0 1347 aa8.9□□□□□ -0.99
SRGAP1-202ENST00000537556 HEG1Q9ULI3 1381 aa8.89□□□□□ -0.99
SRGAP1-202ENST00000537556 POC1B-GALNT4F8VUJ3 575 aa8.89□□□□□ -0.99
SRGAP1-202ENST00000537556 GOLGA8MH3BSY2 632 aa8.89□□□□□ -0.99
SRGAP1-202ENST00000537556 TP73O15350 636 aa8.89□□□□□ -0.99
SRGAP1-202ENST00000537556 BBOX1O75936 387 aa8.89□□□□□ -0.99
SRGAP1-202ENST00000537556 H6PDO95479 791 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms