RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
PRKDC-207ENST00000536483 C8orf33Q9H7E9 229 aaPredicted RBP13.37□□□□□ -0.27
PRKDC-207ENST00000536483 EXOC1Q9NV70 894 aa13.37□□□□□ -0.27
PRKDC-207ENST00000536483 AGAP1Q9UPQ3 857 aa13.37□□□□□ -0.27
PRKDC-207ENST00000536483 TRAF3IP3Q9Y228 551 aa13.37□□□□□ -0.27
PRKDC-207ENST00000536483 ASB3Q9Y575 518 aa13.37□□□□□ -0.27
PRKDC-207ENST00000536483 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
PRKDC-207ENST00000536483 DCDC2BA2VCK2 349 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 CHURC1-FNTBB4DL54 471 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 DPYSL4O14531 572 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 HRO43593 1189 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 KIF20AO95235 890 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 STAU1O95793 577 aaKnown RBP13.36□□□□□ -0.27
PRKDC-207ENST00000536483 GABRR2P28476 465 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
PRKDC-207ENST00000536483 FNTBP49356 437 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 CDR1P51861 262 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 ENPEPQ07075 957 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 SRSF5Q13243 272 aaKnown RBP13.36□□□□□ -0.27
PRKDC-207ENST00000536483 LRRC32Q14392 662 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 LAIR1Q6GTX8 287 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 TXNDC11Q6PKC3 985 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 Q6ZS52 159 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 METTL23Q86XA0 190 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 NELFCDQ8IXH7 590 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 THEM5Q8N1Q8 247 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 SPEM1Q8N4L4 309 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 CSGALNACT2Q8N6G5 542 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 TOP6BLQ8N6T0 577 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 SPATA20Q8TB22 786 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 PSMG2Q969U7 264 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 MSANTD3Q96H12 275 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 ANKRD36BP1Q96IX9 119 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 ACBD6Q9BR61 282 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
PRKDC-207ENST00000536483 CIZ1Q9ULV3 898 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-207ENST00000536483 SCN1AP35498 2009 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 MYBPHLA2RUH7 354 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 CLIC2O15247 247 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 MAPK13O15264 365 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 RETP07949 1114 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 CTHP32929 405 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 TUFMP49411 452 aaKnown RBP13.35□□□□□ -0.27
PRKDC-207ENST00000536483 AP3M2P53677 418 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 SIM2Q14190 667 aaPredicted RBP13.35□□□□□ -0.27
PRKDC-207ENST00000536483 COBLL1Q53SF7 1204 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 C1orf228Q6PIY5 440 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 TRAPPC11Q7Z392 1133 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 LRRTM3Q86VH5 581 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 GUF1Q8N442 669 aaKnown RBP13.35□□□□□ -0.27
PRKDC-207ENST00000536483 PDCL2Q8N4E4 241 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 SPPL2BQ8TCT7 592 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 CCDC34Q96HJ3 373 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 CNTNAP3BQ96NU0 1288 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 PKMYT1Q99640 499 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 CGRRF1Q99675 332 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 RTKNQ9BST9 563 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 CNTNAP3Q9BZ76 1288 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 VRTNQ9H8Y1 702 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 C2orf42Q9NWW7 574 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 L1RE1Q9UN81 338 aa13.35□□□□□ -0.27
PRKDC-207ENST00000536483 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.35□□□□□ -0.27
PRKDC-207ENST00000536483 K7ESF4 209 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 HUS1O60921 280 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 TNNC2P02585 160 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 HOXC13P31276 330 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 LHX1P48742 406 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 CYP4F8P98187 520 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 TNK2Q07912 1038 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 MYO1EQ12965 1108 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 PON2Q15165 354 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 MGAT5BQ3V5L5 792 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 ARHGAP29Q52LW3 1261 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 ARHGAP15Q53QZ3 475 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 HEATR6Q6AI08 1181 aaKnown RBP13.34□□□□□ -0.27
PRKDC-207ENST00000536483 ITIH5Q86UX2 942 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 RALGPS2Q86X27 583 aaPredicted RBP13.34□□□□□ -0.27
PRKDC-207ENST00000536483 DCP1BQ8IZD4 617 aaKnown RBP13.34□□□□□ -0.27
PRKDC-207ENST00000536483 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
PRKDC-207ENST00000536483 HPDLQ96IR7 371 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 SEPT5Q99719 369 aaPredicted RBP13.34□□□□□ -0.27
PRKDC-207ENST00000536483 GDPD2Q9HCC8 539 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
PRKDC-207ENST00000536483 CACNA1BQ00975 2339 aa13.33□□□□□ -0.28
PRKDC-207ENST00000536483 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms