RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 PRKCIP41743 596 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SLC1A4P43007 532 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 MAGEA1P43355 309 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 CASP5P51878 434 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 HNRNPH2P55795 449 aaKnown RBP6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 JAM2P57087 298 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 EPHA7Q15375 998 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SPA17Q15506 151 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 NAB2Q15742 525 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SLC18A3Q16572 532 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 CCDC96Q2M329 555 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 FAM83BQ5T0W9 1011 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 HAUS3Q68CZ6 603 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 STYK1Q6J9G0 422 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 USP17L6PQ6QN14 398 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 TMEM179Q6ZVK1 233 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 RRAGAQ7L523 313 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 IRF2BP2Q7Z5L9 587 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GPBP1Q86WP2 473 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 ZNF761Q86XN6 746 aaPredicted RBP6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 CATSPER3Q86XQ3 398 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 NEK11Q8NG66 645 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SMCR8Q8TEV9 937 aaPredicted RBP6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 INPP4AQ96PE3 977 aaPredicted RBP6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 FIZ1Q96SL8 496 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 OSBPL9Q96SU4 736 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SH3GL2Q99962 352 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 AMNQ9BXJ7 453 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 IFIH1Q9BYX4 1025 aaKnown RBP6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SIX2Q9NPC8 291 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 FAM207AQ9NSI2 230 aaPredicted RBP6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 PI4KBQ9UBF8 816 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 HYOU1Q9Y4L1 999 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 PCDHA1Q9Y5I3 950 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 ZMYM2Q9UBW7 1377 aa6.44□□□□□ -1.38
TNFRSF1A-206ENST00000535038 A0A1W2PRG0 241 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 MACROD2A1Z1Q3 448 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GTPBP10A4D1E9 387 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GRID2IPA4D2P6 1211 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 FAM86B1E9PN63 330 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 F5H6K3 240 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 TRAF5O00463 557 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SLC16A3O15427 465 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 PLA2G6O60733 806 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SHOX2O60902 331 aaPredicted RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 IPO7O95373 1038 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 EYA4O95677 639 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 FUCA1P04066 466 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 NTRK1P04629 796 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 FAM86B2P0C5J1 330 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 IDEP14735 1019 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 MUTP22033 750 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 POLD1P28340 1107 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 MAGEA10P43363 369 aaPredicted RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 ZNF131P52739 623 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 PSMC6P62333 389 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GHRHRQ02643 423 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 KLRC3Q07444 240 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SMAD4Q13485 552 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 EZH2Q15910 746 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 PPP2R5EQ16537 467 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 CERKLQ49MI3 558 aaPredicted RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GLE1Q53GS7 698 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SYDE2Q5VT97 1194 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SFMBT2Q5VUG0 894 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 KRT27Q7Z3Y8 459 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 DCP2Q8IU60 420 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SPATA4Q8NEY3 305 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 TMEM174Q8WUU8 243 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SLC5A5Q92911 643 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 CAVIN3Q969G5 261 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 HSD17B14Q9BPX1 270 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 REEP2Q9BRK0 252 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SYT11Q9BT88 431 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 LSM14BQ9BX40 385 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 STRA6Q9BX79 667 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 MMRN2Q9H8L6 949 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GDF3Q9NR23 364 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 OLFML3Q9NRN5 406 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 DMAC2Q9NW81 257 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 CALCOCO1Q9P1Z2 691 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 RNF14Q9UBS8 474 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SIT1Q9Y3P8 196 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 ASTN1O14525 1302 aa6.43□□□□□ -1.38
TNFRSF1A-206ENST00000535038 A0A087X0T9 212 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 PES1O00541 588 aaKnown RBP6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 SCAMP3O14828 347 aaKnown RBP6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 EIF3DO15371 548 aaKnown RBP eCLIP6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 TGFB1I1O43294 461 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 AKR1B10O60218 316 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 PSMD10O75832 226 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GFPT2O94808 682 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 ITGB3P05106 788 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 FAM228BP0C875 321 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 EPB41P11171 864 aaKnown RBP6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GAP43P17677 238 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 KLRC1P26715 233 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 ACTN2P35609 894 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 GYS2P54840 703 aa6.42□□□□□ -1.38
TNFRSF1A-206ENST00000535038 POLR2FP61218 127 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms