RNA–Protein interactions for RNA: ENST00000534794.1

RSF1-212, Transcript of remodeling and spacing factor 1, humanhuman

TSL 3

Gene RSF1, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-212ENST00000534794 SFRP4Q6FHJ7 346 aaPredicted RBP3.24□□□□□ -1.89
RSF1-212ENST00000534794 GIMAP6Q6P9H5 292 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 KIRREL2Q6UWL6 708 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 NAPRTQ6XQN6 538 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 TRIM72Q6ZMU5 477 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 USP37Q86T82 979 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 ZDHHC17Q8IUH5 632 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 RP9Q8TA86 221 aaKnown RBP3.24□□□□□ -1.89
RSF1-212ENST00000534794 COQ8BQ96D53 544 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 PSMD1Q99460 953 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 THAP7Q9BT49 309 aaPredicted RBP3.24□□□□□ -1.89
RSF1-212ENST00000534794 MRPL46Q9H2W6 279 aaKnown RBP3.24□□□□□ -1.89
RSF1-212ENST00000534794 SLAMF7Q9NQ25 335 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 ADAMTS5Q9UNA0 930 aa3.24□□□□□ -1.89
RSF1-212ENST00000534794 ARID4BQ4LE39 1312 aaPredicted RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 WDR17Q8IZU2 1322 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 ERC2O15083 957 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 XPOTO43592 962 aaKnown RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 FESP07332 822 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 PIM1P11309 404 aaPredicted RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 TKTP29401 623 aaKnown RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 PPIFP30405 207 aaKnown RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 SYDE2Q5VT97 1194 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 FAM160B1Q5W0V3 765 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 FCRL6Q6DN72 434 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 FAM177A1Q8N128 213 aaPredicted RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 NRACQ8N912 160 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 C3orf20Q8ND61 904 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 SPATA3Q8NHX4 192 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 PIGOQ8TEQ8 1089 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 ATG4AQ8WYN0 398 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 DDX17Q92841 729 aaKnown RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 NOTCH4Q99466 2003 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 EBF3Q9H4W6 596 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 TRNAU1APQ9NX07 287 aaKnown RBP3.23□□□□□ -1.89
RSF1-212ENST00000534794 KLHL13Q9P2N7 655 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 HESX1Q9UBX0 185 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 SERTAD3Q9UJW9 196 aa3.23□□□□□ -1.89
RSF1-212ENST00000534794 TTC3P53804 2025 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 CNTNAP2Q9UHC6 1331 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 LY6G6EA0A0G2JKS1 128 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 H3BNC9 293 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 M0QYG6 137 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 SOCS2O14508 198 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 ZRANB2O95218 330 aaKnown RBP eCLIP3.22□□□□□ -1.89
RSF1-212ENST00000534794 NPSP0C0P6 89 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 SNHG28P0DPA3 235 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 CYP2A6P11509 494 aaPredicted RBP3.22□□□□□ -1.89
RSF1-212ENST00000534794 ATP5F1P24539 256 aaPredicted RBP3.22□□□□□ -1.89
RSF1-212ENST00000534794 SMARCA1P28370 1054 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 CCKARP32238 428 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 LOXL3P58215 753 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 HTRA4P83105 476 aaPredicted RBP3.22□□□□□ -1.89
RSF1-212ENST00000534794 NOGQ13253 232 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 PCBP2Q15366 365 aaKnown RBP eCLIP3.22□□□□□ -1.897e-8■■■■■ 31.5
RSF1-212ENST00000534794 UAP1L1Q3KQV9 507 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 PXDC1Q5TGL8 231 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 IRF2BP2Q7Z5L9 587 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 PPP1R3BQ86XI6 285 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 DDX42Q86XP3 938 aaKnown RBP eCLIP3.22□□□□□ -1.89
RSF1-212ENST00000534794 CNGA4Q8IV77 575 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 LRRC71Q8N4P6 559 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 FAM46DQ8NEK8 389 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 VCPIP1Q96JH7 1222 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 SLC46A1Q96NT5 459 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 WDCPQ9H6R7 721 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.22□□□□□ -1.89
RSF1-212ENST00000534794 MCM8Q9UJA3 840 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 TRHDEQ9UKU6 1024 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 GABRQQ9UN88 632 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 POLHQ9Y253 713 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 PRKAB1Q9Y478 270 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 PCDHA3Q9Y5H8 950 aa3.22□□□□□ -1.89
RSF1-212ENST00000534794 CCDC187A0A096LP49 1063 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 A1L4Q6 167 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 POC1B-GALNT4F8VUJ3 575 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 FCHO1O14526 889 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 GABRDO14764 452 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 PPM1GO15355 546 aaPredicted RBP3.21□□□□□ -1.9
RSF1-212ENST00000534794 ARIH2O95376 493 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 FGBP02675 491 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 GNAI2P04899 355 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 CHRM5P08912 532 aaPredicted RBP3.21□□□□□ -1.9
RSF1-212ENST00000534794 MYBL2P10244 700 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 PLCD1P51178 756 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 HK3P52790 923 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 ODF1Q14990 250 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 LRRC41Q15345 812 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 TWIST1Q15672 202 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 MIDNQ504T8 468 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 MEX3CQ5U5Q3 659 aaKnown RBP3.21□□□□□ -1.9
RSF1-212ENST00000534794 Q6ZWC4 215 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 PARS2Q7L3T8 475 aaKnown RBP3.21□□□□□ -1.9
RSF1-212ENST00000534794 TICAM2Q86XR7 235 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 GALNT4Q8N4A0 578 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 NANOGP1Q8N7R0 232 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 GLG1Q92896 1179 aa3.21□□□□□ -1.9
RSF1-212ENST00000534794 TNPO1Q92973 898 aaKnown RBP3.21□□□□□ -1.9
RSF1-212ENST00000534794 LENG8Q96PV6 779 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms