RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PPP4R3AQ6IN85 833 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 USP49Q70CQ1 688 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 TMEM150AQ86TG1 271 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 MON1AQ86VX9 555 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 ZBTB8OSQ8IWT0 167 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 ZCCHC9Q8N567 271 aaKnown RBP11.51□□□□□ -0.57
CSDE1-215ENST00000533818 ZNF248Q8NDW4 579 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 GIPC2Q8TF65 315 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 ACAP3Q96P50 834 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 SEPT5Q99719 369 aaPredicted RBP11.51□□□□□ -0.57
CSDE1-215ENST00000533818 LRRC2Q9BYS8 371 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 LNPKQ9C0E8 428 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 C2CD3Q4AC94 2353 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 MYO16Q9Y6X6 1858 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 PLXND1Q9Y4D7 1925 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 CYP3A7-CYP3A51PA0A087WV96 503 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 MYMKA6NI61 221 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 DGAT1O75907 488 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 NFATC1O95644 943 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 F11P03951 625 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 LIG1P18858 919 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 CYP3A7P24462 503 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 KIR2DL1P43626 348 aaPredicted RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 TUFMP49411 452 aaKnown RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 NLRP12P59046 1061 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 HNRNPUQ00839 825 aaKnown RBP eCLIP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 BNC1Q01954 994 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 FAM160A1Q05DH4 1040 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 ZNF77Q15935 545 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 APOA5Q6Q788 366 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 USP37Q86T82 979 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 TBCKQ8TEA7 893 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 DNASE2BQ8WZ79 361 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 C18orf25Q96B23 403 aaPredicted RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 ZMAT2Q96NC0 199 aaKnown RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 TOPORSQ9NS56 1045 aaPredicted RBP11.5□□□□□ -0.57
CSDE1-215ENST00000533818 ARID2Q68CP9 1835 aa11.5□□□□□ -0.57
CSDE1-215ENST00000533818 MEI4A8MW99 385 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 ACKR2O00590 384 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 KAT7O95251 611 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 LARGE1O95461 756 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 APODP05090 189 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 ATF6P18850 670 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 SLC6A11P48066 632 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 MESP2Q0VG99 397 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 CTTNQ14247 550 aaKnown RBP11.49□□□□□ -0.57
CSDE1-215ENST00000533818 MYBPC2Q14324 1141 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 SF3A1Q15459 793 aaKnown RBP11.49□□□□□ -0.57
CSDE1-215ENST00000533818 GAB4Q2WGN9 574 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 MGAT5BQ3V5L5 792 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 XKR4Q5GH76 650 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 ALKAL1Q6UXT8 129 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 TPH2Q8IWU9 490 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 SNRNP27Q8WVK2 155 aaKnown RBP11.49□□□□□ -0.57
CSDE1-215ENST00000533818 DYDC2Q96IM9 177 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 YTHDC1Q96MU7 727 aaKnown RBP11.49□□□□□ -0.57
CSDE1-215ENST00000533818 PNKPQ96T60 521 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 HSPBP1Q9NZL4 362 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 HSFX1Q9UBD0 423 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 FTSJ1Q9UET6 329 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 VAV3Q9UKW4 847 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 PCDHGA1Q9Y5H4 931 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 NID2Q14112 1375 aa11.49□□□□□ -0.57
CSDE1-215ENST00000533818 CABIN1Q9Y6J0 2220 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 BCAT2O15382 392 aaPredicted RBP11.48□□□□□ -0.57
CSDE1-215ENST00000533818 ZBTB43O43298 467 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 CDK4P11802 303 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 HSPA4P34932 840 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 TNFRSF4P43489 277 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 CDR1P51861 262 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 NFKB2Q00653 900 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 EPHA7Q15375 998 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 HES3Q5TGS1 186 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 KIAA1614Q5VZ46 1190 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 CDCA2Q69YH5 1023 aaPredicted RBP11.48□□□□□ -0.57
CSDE1-215ENST00000533818 MAEAQ7L5Y9 396 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 APBB1IPQ7Z5R6 666 aaPredicted RBP11.48□□□□□ -0.57
CSDE1-215ENST00000533818 TSC1Q92574 1164 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 PSMG3-AS1Q96PY0 264 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 CYP2S1Q96SQ9 504 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 CCDC94Q9BW85 323 aaPredicted RBP11.48□□□□□ -0.57
CSDE1-215ENST00000533818 NFE2L3Q9Y4A8 694 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 BOD1L1Q8NFC6 3051 aa11.48□□□□□ -0.57
CSDE1-215ENST00000533818 A0A0A0MRY4 1105 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 M0QZQ0 153 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 USP17L7P0C7H9 530 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 KCNE1P15382 129 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 GRIA2P42262 883 aa11.47□□□□□ -0.57
CSDE1-215ENST00000533818 PCBP4P57723 403 aaKnown RBP11.47□□□□□ -0.57
CSDE1-215ENST00000533818 OSTNP61366 133 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms