RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 NXF1Q9UBU9 619 aaKnown RBP12.58□□□□□ -0.4
ATM-222ENST00000533733 SIX4Q9UIU6 781 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 BARX2Q9UMQ3 279 aaPredicted RBP12.58□□□□□ -0.4
ATM-222ENST00000533733 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.58□□□□□ -0.4
ATM-222ENST00000533733 NAALADL1Q9UQQ1 740 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 SRCAPQ6ZRS2 3230 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 ADM5C9JUS6 153 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 APOC4-APOC2K7ER74 178 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 SNX3O60493 162 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 LRCH4O75427 683 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 APOC2P02655 101 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 LGALS2P05162 132 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 PGK2P07205 417 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 KRT10P13645 584 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 KDELR1P24390 212 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 STIP1P31948 543 aaKnown RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 STX2P32856 288 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 RFC1P35251 1148 aaPredicted RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 VPS41P49754 854 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 RBP5P82980 135 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 IL9RQ01113 521 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 SNAPC2Q13487 334 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 MOGSQ13724 837 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 TFDP2Q14188 446 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 DCAF4L1Q3SXM0 396 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 ZNF394Q53GI3 561 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 RNASEH2BQ5TBB1 312 aaKnown RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 DAB2IPQ5VWQ8 1189 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 EEF1DP3Q658K8 133 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 DENND1BQ6P3S1 775 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 SCARA5Q6ZMJ2 495 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 ZNF410Q86VK4 478 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 SLC4A11Q8NBS3 891 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 CMASQ8NFW8 434 aaPredicted RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 USP6NLQ92738 828 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 CDCA5Q96FF9 252 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 IFT122Q9HBG6 1241 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 USP15Q9Y4E8 981 aaPredicted RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 PDCD11Q14690 1871 aaKnown RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 CFAP73A6NFT4 308 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 FAM47DPA6NHR8 397 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 LACTBL1A8MY62 500 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 SGK1O00141 431 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 STRNO43815 780 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 OAS1P00973 400 aaKnown RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 ITGB3P05106 788 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 INSRRP14616 1297 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 ATP2A2P16615 1042 aaKnown RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 CLCN3P51790 818 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 ARL4CP56559 192 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 PLCB3Q01970 1234 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 ARHGAP1Q07960 439 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 MYO1EQ12965 1108 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 XRCC4Q13426 336 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 TMEM132DQ14C87 1099 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 AMHR2Q16671 573 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 ATP13A4Q4VNC1 1196 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 ARMCX2Q7L311 632 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 RSAD2Q8WXG1 361 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 TSPAN18Q96SJ8 248 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 CNPY3Q9BT09 278 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 PDZD7Q9H5P4 517 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 TXNRD2Q9NNW7 524 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 KCNK9Q9NPC2 374 aa12.57□□□□□ -0.4
ATM-222ENST00000533733 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
ATM-222ENST00000533733 SCN4AP35499 1836 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 RASA4BC9J798 803 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 GPR25O00155 361 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 MCF2LO15068 1137 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 B4GALT5O43286 388 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 RASA4O43374 803 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 SPAG6O75602 509 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 TOMM70O94826 608 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 DDNO94850 711 aaPredicted RBP12.56□□□□□ -0.4
ATM-222ENST00000533733 GJB6O95452 261 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 NFICP08651 508 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 PECAM1P16284 738 aaPredicted RBP12.56□□□□□ -0.4
ATM-222ENST00000533733 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
ATM-222ENST00000533733 SCTRP47872 440 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 ZNF143P52747 638 aaPredicted RBP12.56□□□□□ -0.4
ATM-222ENST00000533733 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
ATM-222ENST00000533733 HIF1AQ16665 826 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 KLHL38Q2WGJ6 581 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 Q3C1V9 767 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 CYP4A22Q5TCH4 519 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 JADE1Q6IE81 842 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 C4orf22Q6V702 233 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 RGS9BPQ6ZS82 235 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 TRPM8Q7Z2W7 1104 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 MAP7D3Q8IWC1 876 aa12.56□□□□□ -0.4
ATM-222ENST00000533733 ATP11CQ8NB49 1132 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms