RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 TATDN2Q93075 761 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 SPATA17Q96L03 361 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 FUCA2Q9BTY2 467 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 GPR88Q9GZN0 384 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 CISHQ9NSE2 258 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 SAMSN1Q9NSI8 373 aaKnown RBP22.31■■□□□ 1.16
VPS51-211ENST00000533487 GCNT4Q9P109 453 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 CEP72Q9P209 647 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 UXTQ9UBK9 157 aaPredicted RBP22.31■■□□□ 1.16
VPS51-211ENST00000533487 KIAA1257Q9ULG3 409 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 NME7Q9Y5B8 376 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 NOTCH4Q99466 2003 aa22.31■■□□□ 1.16
VPS51-211ENST00000533487 SPTBN5Q9NRC6 3674 aaKnown RBP22.3■■□□□ 1.16
VPS51-211ENST00000533487 ATP2C2O75185 946 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 CYP27A1Q02318 531 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 TAF12Q16514 161 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 EXOC3L4Q17RC7 722 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 PDZD4Q76G19 769 aaPredicted RBP22.3■■□□□ 1.16
VPS51-211ENST00000533487 NXPE3Q969Y0 559 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 C8orf48Q96LL4 319 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 GDE1Q9NZC3 331 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 NCOR1O75376 2440 aa22.3■■□□□ 1.16
VPS51-211ENST00000533487 DOCK8Q8NF50 2099 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 SOBPA7XYQ1 873 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 CYP2F1P24903 491 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 ANXA13P27216 316 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 ZNF165P49910 485 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 DNAJB7Q7Z6W7 309 aaPredicted RBP22.29■■□□□ 1.16
VPS51-211ENST00000533487 ACOT1Q86TX2 421 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 FAM200AQ8TCP9 573 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 TRMT2BQ96GJ1 504 aaKnown RBP22.29■■□□□ 1.16
VPS51-211ENST00000533487 SMARCD1Q96GM5 515 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 CORO1BQ9BR76 489 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 INTS2Q9H0H0 1204 aaKnown RBP22.29■■□□□ 1.16
VPS51-211ENST00000533487 DPEP3Q9H4B8 488 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 FANCLQ9NW38 375 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 EPS15L1Q9UBC2 864 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 MRPS23Q9Y3D9 190 aaKnown RBP22.29■■□□□ 1.16
VPS51-211ENST00000533487 DOCK6Q96HP0 2047 aa22.29■■□□□ 1.16
VPS51-211ENST00000533487 GREB1Q4ZG55 1949 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 SYCE3A1L190 88 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 LRRC10BA6NIK2 292 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 HCRTO43612 131 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 LRRN2O75325 713 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 ATF6P18850 670 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 CD58P19256 250 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 NFKBIBQ15653 356 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 MIIPQ5JXC2 388 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 TRIM65Q6PJ69 517 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 PPM1KQ8N3J5 372 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 TTC9BQ8N6N2 239 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 TMEM176AQ96HP8 235 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 RPGRIP1Q96KN7 1286 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 MYRFLQ96LU7 910 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 HNRNPABQ99729 332 aaKnown RBP22.28■■□□□ 1.16
VPS51-211ENST00000533487 CDH22Q9UJ99 828 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 CDH7Q9ULB5 785 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 DAAM1Q9Y4D1 1078 aa22.28■■□□□ 1.16
VPS51-211ENST00000533487 MYH10P35580 1976 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 ZNF18P17022 549 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 RFX1P22670 979 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 BDNFP23560 247 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 CDC25CP30307 473 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 SSTR3P32745 418 aaPredicted RBP22.27■■□□□ 1.16
VPS51-211ENST00000533487 GRIK1P39086 918 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 NCAPHQ15003 741 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 ZSCAN23Q3MJ62 389 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 PRSS36Q5K4E3 855 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 UBR7Q8N806 425 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 WHAMMQ8TF30 809 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 LRRC3Q9BY71 257 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 B3GNT5Q9BYG0 378 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.27■■□□□ 1.16
VPS51-211ENST00000533487 HCFC1R1Q9NWW0 138 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 COMMD8Q9NX08 183 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 IGSF9Q9P2J2 1179 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 APEX2Q9UBZ4 518 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 LIMA1Q9UHB6 759 aaKnown RBP22.27■■□□□ 1.16
VPS51-211ENST00000533487 DENND4CQ5VZ89 1909 aa22.27■■□□□ 1.16
VPS51-211ENST00000533487 BECN2A8MW95 431 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 NOL4O94818 638 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 PAEPP09466 180 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 CDK11BP21127 795 aaKnown RBP22.26■■□□□ 1.15
VPS51-211ENST00000533487 GBP2P32456 591 aaPredicted RBP22.26■■□□□ 1.15
VPS51-211ENST00000533487 MFAP3P55082 362 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 FAM35AQ86V20 835 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 FUKQ8N0W3 1084 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 ELMO3Q96BJ8 720 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 CYFIP2Q96F07 1278 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 GCNAQ96QF7 691 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 CSNK1G1Q9HCP0 422 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 PNPLA8Q9NP80 782 aa22.26■■□□□ 1.15
VPS51-211ENST00000533487 DMAP1Q9NPF5 467 aaPredicted RBP22.26■■□□□ 1.15
VPS51-211ENST00000533487 C2CD4DB7Z1M9 353 aa22.25■■□□□ 1.15
VPS51-211ENST00000533487 LAMP2P13473 410 aa22.25■■□□□ 1.15
VPS51-211ENST00000533487 DDX6P26196 483 aaKnown RBP eCLIP22.25■■□□□ 1.15
VPS51-211ENST00000533487 PON1P27169 355 aa22.25■■□□□ 1.15
VPS51-211ENST00000533487 PPP3CCP48454 512 aa22.25■■□□□ 1.15
VPS51-211ENST00000533487 RAD23BP54727 409 aa22.25■■□□□ 1.15
VPS51-211ENST00000533487 TPM4P67936 248 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms