RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 CDH8P55286 799 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 RPL10AP62906 217 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 ORC1Q13415 861 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 MAPRE1Q15691 268 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 WDR44Q5JSH3 913 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 NPAS3Q8IXF0 933 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 LEMD2Q8NC56 503 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 FBXL13Q8NEE6 735 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 RSAD2Q8WXG1 361 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 TAF4BQ92750 862 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 TCEAL4Q96EI5 215 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 CEP63Q96MT8 703 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 KXD1Q9BQD3 176 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 MED10Q9BTT4 135 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 DPEP3Q9H4B8 488 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 MAGEC2Q9UBF1 373 aaPredicted RBP12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 SORCS3Q9UPU3 1222 aa12.24□□□□□ -0.45
UBASH3B-208ENST00000533451 ZNF638Q14966 1978 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ATP8B3O60423 1300 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 A0A1W2PRU2 124 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 GABRDO14764 452 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 TACC1O75410 805 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 FGFR1OPO95684 399 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ASS1P00966 412 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 BDNFP23560 247 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 GRIK1P39086 918 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ZXDAP98168 799 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 TDGQ13569 410 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 TEAD2Q15562 447 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 DDR2Q16832 855 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ARHGAP15Q53QZ3 475 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 DNAJB7Q7Z6W7 309 aaPredicted RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 DUSP9Q99956 384 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 SRRTQ9BXP5 876 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 NIF3L1Q9GZT8 377 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 DNAJC25Q9H1X3 360 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ATXN3LQ9H3M9 355 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 SMOC2Q9H3U7 446 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 KCNK12Q9HB15 430 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 METTL14Q9HCE5 456 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ABCB6Q9NP58 842 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 CRTAC1Q9NQ79 661 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 IGSF9Q9P2J2 1179 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 EPS15L1Q9UBC2 864 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 HSFX1Q9UBD0 423 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 DACH1Q9UI36 760 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 FBXL21Q9UKT6 434 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ASB3Q9Y575 518 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 ZFP37Q9Y6Q3 630 aaPredicted RBP12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 NUMBLQ9Y6R0 609 aa12.23□□□□□ -0.45
UBASH3B-208ENST00000533451 SPTBN5Q9NRC6 3674 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 PTPRDP23468 1912 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 PAPLNO95428 1278 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 PTPN1P18031 435 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 RFX1P22670 979 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 GABRR2P28476 465 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 CCR2P41597 374 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 ASPAP45381 313 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 ENPEPQ07075 957 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 CETN1Q12798 172 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 IFRD2Q12894 506 aaPredicted RBP12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 LRMPQ12912 555 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 MTSS1LQ765P7 747 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 FRMD5Q7Z6J6 570 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 FILIP1Q7Z7B0 1213 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 ACOT1Q86TX2 421 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 MLKLQ8NB16 471 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 MYCBPAPQ8TBZ2 947 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 EDAQ92838 391 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 PSMG2Q969U7 264 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 PCED1BQ96HM7 432 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 DNAI2Q9GZS0 605 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 SDCBP2Q9H190 292 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 MFSD1Q9H3U5 465 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 VRTNQ9H8Y1 702 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 ZNF334Q9HCZ1 680 aaPredicted RBP12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 FAM49BQ9NUQ9 324 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 RWDD2AQ9UIY3 292 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
UBASH3B-208ENST00000533451 TECTAO75443 2155 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 LRRN2O75325 713 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 FGF19O95750 216 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 GNA14O95837 355 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 MBD3O95983 291 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 CDC25CP30307 473 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 FMO5P49326 533 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 NDST1P52848 882 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 CYP4F8P98187 520 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 HTR4Q13639 388 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 DPCR1Q3MIW9 517 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 PRSS36Q5K4E3 855 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms