RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 DEPDC1BQ8WUY9 529 aa19.07■□□□□ 0.64
SMG1-203ENST00000532700 CLDN23Q96B33 292 aa19.07■□□□□ 0.64
SMG1-203ENST00000532700 CHFRQ96EP1 664 aa19.07■□□□□ 0.64
SMG1-203ENST00000532700 SDCBP2Q9H190 292 aa19.07■□□□□ 0.64
SMG1-203ENST00000532700 TASP1Q9H6P5 420 aa19.07■□□□□ 0.64
SMG1-203ENST00000532700 GTSE1Q9NYZ3 720 aa19.07■□□□□ 0.64
SMG1-203ENST00000532700 MAPK8IP1Q9UQF2 711 aa19.07■□□□□ 0.64
SMG1-203ENST00000532700 ZNF263O14978 683 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 NOL4O94818 638 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 RAP1GAPP47736 663 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 LHX1P48742 406 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 USP46P62068 366 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 SMARCB1Q12824 385 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 NFE2Q16621 373 aaPredicted RBP19.06■□□□□ 0.64
SMG1-203ENST00000532700 TSSK4Q6SA08 328 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 KRBA2Q6ZNG9 492 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 PARD3BQ8TEW8 1205 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 IRF7Q92985 503 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 USP13Q92995 863 aaPredicted RBP19.06■□□□□ 0.64
SMG1-203ENST00000532700 FNBP1Q96RU3 617 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 MMS19Q96T76 1030 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 GPR88Q9GZN0 384 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 IRF2BPLQ9H1B7 796 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 SMYD3Q9H7B4 428 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 ABCB6Q9NP58 842 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 TRPV5Q9NQA5 729 aa19.06■□□□□ 0.64
SMG1-203ENST00000532700 OTOL1A6NHN0 477 aaPredicted RBP19.05■□□□□ 0.64
SMG1-203ENST00000532700 C4BPAP04003 597 aaKnown RBP19.05■□□□□ 0.64
SMG1-203ENST00000532700 NR3C1P04150 777 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 BDNFP23560 247 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 CCNE1P24864 410 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 CDC25CP30307 473 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 CDH8P55286 799 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 SNRPFP62306 86 aaKnown RBP19.05■□□□□ 0.64
SMG1-203ENST00000532700 GAS6Q14393 721 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 WDR72Q3MJ13 1102 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 CFAP221Q4G0U5 840 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 MDH1BQ5I0G3 518 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 ZNF852Q6ZMS4 543 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 SPATA2LQ8IUW3 424 aaPredicted RBP19.05■□□□□ 0.64
SMG1-203ENST00000532700 SCN4BQ8IWT1 228 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 CMTM8Q8IZV2 173 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 SPATA18Q8TC71 538 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 PCED1BQ96HM7 432 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 OSBPL6Q9BZF3 934 aa19.05■□□□□ 0.64
SMG1-203ENST00000532700 RBM12Q9NTZ6 932 aaKnown RBP19.05■□□□□ 0.64
SMG1-203ENST00000532700 SPATA6Q9NWH7 488 aaPredicted RBP19.05■□□□□ 0.64
SMG1-203ENST00000532700 A0A1W2PQ27 194 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 A0A1W2PQ64 194 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 A0A1W2PQD8 194 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 CLDN5O00501 218 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 CHADO15335 359 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 PCSK1P29120 753 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 CLDN10P78369 228 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 MTAPQ13126 283 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 ARHGAP15Q53QZ3 475 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 NAIF1Q69YI7 327 aaPredicted RBP19.04■□□□□ 0.64
SMG1-203ENST00000532700 TRIM68Q6AZZ1 485 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 DPH6Q7L8W6 267 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 SMYD4Q8IYR2 804 aaPredicted RBP19.04■□□□□ 0.64
SMG1-203ENST00000532700 FAM3CQ92520 227 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 CYP2S1Q96SQ9 504 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 BCO2Q9BYV7 579 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 C2orf42Q9NWW7 574 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 CGNQ9P2M7 1197 aaKnown RBP19.04■□□□□ 0.64
SMG1-203ENST00000532700 NXF1Q9UBU9 619 aaKnown RBP19.04■□□□□ 0.64
SMG1-203ENST00000532700 USP25Q9UHP3 1055 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 CDH9Q9ULB4 789 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 F5P12259 2224 aa19.04■□□□□ 0.64
SMG1-203ENST00000532700 MYO16Q9Y6X6 1858 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 KIAA1549LQ6ZVL6 1849 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 C2orf78A6NCI8 922 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 RHOBTB3O94955 611 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 ZNF202O95125 648 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 FGF19O95750 216 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 CYP27A1Q02318 531 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 PSMD2Q13200 908 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 ORC1Q13415 861 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 TAF12Q16514 161 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 SCARA5Q6ZMJ2 495 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 SLC9A9Q8IVB4 645 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 ERCC4Q92889 916 aaPredicted RBP19.03■□□□□ 0.64
SMG1-203ENST00000532700 NKD2Q969F2 451 aaPredicted RBP19.03■□□□□ 0.64
SMG1-203ENST00000532700 MYRFLQ96LU7 910 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 ZNF518BQ9C0D4 1074 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 HPS4Q9NQG7 708 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.03■□□□□ 0.646e-9■■■■■ 134.6
SMG1-203ENST00000532700 HMGXB4Q9UGU5 601 aa19.03■□□□□ 0.64
SMG1-203ENST00000532700 CFAP54Q96N23 3096 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 PDXKO00764 312 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 TACC1O75410 805 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 STAU1O95793 577 aaKnown RBP19.02■□□□□ 0.64
SMG1-203ENST00000532700 CSH1P0DML2 217 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 CSH2P0DML3 217 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 CHRNB1P11230 501 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 WEE1P30291 646 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 MAGEA11P43364 429 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 RPL10AP62906 217 aaKnown RBP19.02■□□□□ 0.64
SMG1-203ENST00000532700 ZXDBP98169 803 aa19.02■□□□□ 0.64
SMG1-203ENST00000532700 SPOPLQ6IQ16 392 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms