RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 ZNF284Q2VY69 593 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 HSDL1Q3SXM5 330 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 OTOP3Q7RTS5 596 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 TTC8Q8TAM2 541 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 TMA16Q96EY4 203 aaKnown RBP12.17□□□□□ -0.46
CSRP1-215ENST00000532313 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 PRDM16Q9HAZ2 1276 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 TBC1D3BA6NDS4 549 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 SMAPO00193 183 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 NFATC1O95644 943 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 CYP2C18P33260 490 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 E2F7Q96AV8 911 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 SRPK1Q96SB4 655 aaKnown RBP12.17□□□□□ -0.46
CSRP1-215ENST00000532313 CBWD1Q9BRT8 395 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 TMEM175Q9BSA9 504 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 ABCC13Q9NSE7 274 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 MRFAP1Q9Y605 127 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 TREHO43280 583 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 APBA1Q02410 837 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 AMHR2Q16671 573 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 C17orf99Q6UX52 265 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 LRRC8AQ8IWT6 810 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 MTMR9Q96QG7 549 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
CSRP1-215ENST00000532313 DNMT3LQ9UJW3 386 aa12.17□□□□□ -0.46
CSRP1-215ENST00000532313 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
CSRP1-215ENST00000532313 EPHB2P29323 1055 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CCL14Q16627 93 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 LZTR1Q8N653 840 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 SPATA16Q9BXB7 569 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CSDE1O75534 798 aaKnown RBP12.16□□□□□ -0.46
CSRP1-215ENST00000532313 MYL6P60660 151 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CPLX4Q7Z7G2 160 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 DBF4BQ8NFT6 615 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CALML6Q8TD86 181 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 DEPDC1BQ8WUY9 529 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 ACO2Q99798 780 aaKnown RBP12.16□□□□□ -0.46
CSRP1-215ENST00000532313 FRMD8P1Q9BZ68 369 aaPredicted RBP12.16□□□□□ -0.46
CSRP1-215ENST00000532313 GPR63Q9BZJ6 419 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 RAD18Q9NS91 495 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 RSPH14Q9UHP6 348 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 BCAP29Q9UHQ4 241 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 ASB3Q9Y575 518 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 TAF6LQ9Y6J9 622 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 C1QTNF3-AMACRE9PGA6 284 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 HIST1H2AGP0C0S8 130 aaPredicted RBP12.16□□□□□ -0.46
CSRP1-215ENST00000532313 HDCP19113 662 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 HIST1H2ADP20671 130 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 FAM46CQ5VWP2 391 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 HIST1H2AHQ96KK5 128 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 HIST1H2AJQ99878 128 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 H2AFJQ9BTM1 129 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CISHQ9NSE2 258 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CAPN11Q9UMQ6 739 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CLUHO75153 1309 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 KCNA2P16389 499 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 ETF1P62495 437 aaKnown RBP12.16□□□□□ -0.46
CSRP1-215ENST00000532313 POU5F1Q01860 360 aaKnown RBP12.16□□□□□ -0.46
CSRP1-215ENST00000532313 SNX1Q13596 522 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CAPSQ13938 189 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 SEZ6Q53EL9 994 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 LINC00523Q86TU6 105 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 IL31RAQ8NI17 732 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 CLEC4DQ8WXI8 215 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 IL23AQ9NPF7 189 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 ABHD10Q9NUJ1 306 aa12.16□□□□□ -0.46
CSRP1-215ENST00000532313 FAM170AA1A519 330 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 IGF2BP3O00425 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 TAL1P17542 331 aaPredicted RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 BRD2P25440 801 aaKnown RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 ARHGAP25P42331 645 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 MAPK8P45983 427 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 PDK2Q15119 407 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 UGP2Q16851 508 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 TRIM60Q495X7 471 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 AARS2Q5JTZ9 985 aaKnown RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 SPACA7Q96KW9 195 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 PTPN2P17706 415 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 CCND3P30281 292 aaPredicted RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 PRKCQQ04759 706 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 PYROXD1Q8WU10 500 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 TEPSINQ96N21 525 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 PI4K2AQ9BTU6 479 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 ZCCHC2Q9C0B9 1178 aaKnown RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 CDT1Q9H211 546 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 AFDNP55196 1824 aaKnown RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 EML1O00423 815 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 POLR2LP62875 67 aaKnown RBP12.15□□□□□ -0.46
CSRP1-215ENST00000532313 GTF2BQ00403 316 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
CSRP1-215ENST00000532313 TAB3Q8N5C8 712 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms