RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 CSRNP2Q9H175 543 aa4.8□□□□□ -1.64
PTPRC-214ENST00000530727 CHMP4BQ9H444 224 aaKnown RBP4.8□□□□□ -1.64
PTPRC-214ENST00000530727 C14orf119Q9NWQ9 140 aa4.8□□□□□ -1.64
PTPRC-214ENST00000530727 AURKAIP1Q9NWT8 199 aaPredicted RBP4.8□□□□□ -1.64
PTPRC-214ENST00000530727 HYPKQ9NX55 129 aa4.8□□□□□ -1.64
PTPRC-214ENST00000530727 TMOD3Q9NYL9 352 aa4.8□□□□□ -1.64
PTPRC-214ENST00000530727 PGAP2Q9UHJ9 254 aa4.8□□□□□ -1.64
PTPRC-214ENST00000530727 DNM3Q9UQ16 869 aa4.8□□□□□ -1.64
PTPRC-214ENST00000530727 SLC45A1Q9Y2W3 748 aa4.8□□□□□ -1.64
PTPRC-214ENST00000530727 COL5A3P25940 1745 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 PI4KAP2A4QPH2 592 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 A6NCN8 305 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 A6NNZ2 444 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 AP1G1O43747 822 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 STC2O76061 302 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 C6P13671 934 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 WNT3AP56704 352 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 CDK17Q00537 523 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 MEF2AQ02078 507 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 KLF1Q13351 362 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 CMTR2Q8IYT2 770 aaKnown RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 PI4KAP1Q8N8J0 262 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 C1orf162Q8NEQ5 155 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 LMBR1Q8WVP7 490 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 PAWRQ96IZ0 340 aaKnown RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 CRB3Q9BUF7 120 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 RWDD1Q9H446 243 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 C1orf112Q9NSG2 853 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 HECAQ9UBI9 543 aaPredicted RBP4.79□□□□□ -1.64
PTPRC-214ENST00000530727 BRWD3Q6RI45 1802 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 AFF2P51816 1311 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 NHSQ6T4R5 1651 aa4.79□□□□□ -1.64
PTPRC-214ENST00000530727 TPP1O14773 563 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 GYPEP15421 78 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 TACR2P21452 398 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 NUCB1Q02818 461 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 FOXE3Q13461 319 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 RRP1BQ14684 758 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 FAM214AQ32MH5 1076 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CEP85Q6P2H3 762 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 B3GNT9Q6UX72 402 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 Q6ZRM9 215 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 RPAP2Q8IXW5 612 aaPredicted RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 ANKRD44Q8N8A2 993 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 DNAAF4Q8WXU2 420 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 AUTS2Q8WXX7 1259 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CDK5RAP3Q96JB5 506 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CCDC138Q96M89 665 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PLEKHG4BQ96PX9 1271 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 TRMT13Q9NUP7 481 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 UTYO14607 1347 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 BTAF1O14981 1849 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 AFDNP55196 1824 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 hCG_1642624A0A1W2PR95 340 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PCDHGA12O60330 932 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 TMEM127O75204 238 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 ZRANB2O95218 330 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 IGKV5-2P06315 115 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 MTHFD2P13995 350 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CHKAP35790 457 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 MAN2A2P49641 1150 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 EIF5P55010 431 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CCT2P78371 535 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 MRPS9P82933 396 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 ZNF267Q14586 743 aaPredicted RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 LLGL1Q15334 1064 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 IFIT1BQ5T764 474 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 ABHD15Q6UXT9 468 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 COPS6Q7L5N1 327 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CATIPQ7Z7H3 387 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 FAM43AQ8N2R8 423 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 SGCZQ96LD1 299 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 TBATAQ96M53 351 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 TAAR9Q96RI9 348 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 NUP88Q99567 741 aaPredicted RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 CENPOQ9BU64 300 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 GPR87Q9BY21 358 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 ALDH8A1Q9H2A2 487 aaPredicted RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 DCTPP1Q9H773 170 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 RSAD1Q9HA92 442 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 NMRK2Q9NPI5 230 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 MKS1Q9NXB0 559 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 FRMD4BQ9Y2L6 1034 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 MAP3K2Q9Y2U5 619 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PCDHGA9Q9Y5G4 932 aaKnown RBP4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PCDHGA8Q9Y5G5 932 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PCDHGA7Q9Y5G6 932 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PCDHGA6Q9Y5G7 932 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PCDHGA3Q9Y5H0 932 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 PCDHGA2Q9Y5H1 932 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 LY75O60449 1722 aa4.78□□□□□ -1.64
PTPRC-214ENST00000530727 NUP98P52948 1817 aa4.77□□□□□ -1.65
PTPRC-214ENST00000530727 J3KRW8 73 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms