RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 NRCAMQ92823 1304 aa9.72□□□□□ -0.85
CCDC90B-217ENST00000530253 A0A087WWV3 80 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 A0A087X0B3 334 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 SH3D21A4FU49 640 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 C9IYK1 514 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 SLC26A4O43511 780 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 PQBP1O60828 265 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 DKC1O60832 514 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 NCLP19338 710 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 YWHABP31946 246 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 RARRES1P49788 294 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 FXR1P51114 621 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 NPEPPSP55786 919 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 FAM47CQ5HY64 1035 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 ZNF484Q5JVG2 852 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 KRT79Q5XKE5 535 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 RUFY4Q6ZNE9 571 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 CLEC17AQ6ZS10 378 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 SERINC5Q86VE9 423 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 LSRQ86X29 649 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 TPH2Q8IWU9 490 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 CKAP2LQ8IYA6 745 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 EPSTI1Q96J88 318 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 SPATA32Q96LK8 384 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 SH2D3AQ9BRG2 576 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 SPON2Q9BUD6 331 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 SCAND2PQ9GZW5 306 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 PRO3102Q9H379 93 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 ANKEF1Q9NU02 776 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 DDX19AQ9NUU7 478 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 ATP11BQ9Y2G3 1177 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 MROH7Q68CQ1 1323 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 KDM3AQ9Y4C1 1321 aa9.71□□□□□ -0.86
CCDC90B-217ENST00000530253 LTBP2Q14767 1821 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 IGKV6-21A0A0C4DH24 114 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 FAM237AA0A1B0GTK4 181 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 TRIM43BA6NCK2 446 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 RRN3P2A6NIE6 340 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 E9PMD0 336 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 CYP2C9P11712 490 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 XRCC6P12956 609 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 L1CAMP32004 1257 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 ME1P48163 572 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 IGBP1P78318 339 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 POU4F1Q01851 419 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 KARSQ15046 597 aaKnown RBP9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 PTGISQ16647 500 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 MTERF2Q49AM1 385 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 NAALADL2Q58DX5 795 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 NT5DC1Q5TFE4 455 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 RESP18Q5W5W9 173 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 MTHFD1LQ6UB35 978 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 TMEM87AQ8NBN3 555 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 PIGOQ8TEQ8 1089 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 TRIM43Q96BQ3 446 aaPredicted RBP9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 PTCHD1Q96NR3 888 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 GP6Q9HCN6 339 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 XPNPEP1Q9NQW7 623 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 CYP26B1Q9NR63 512 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 NRBP2Q9NSY0 501 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 BLOC1S4Q9NUP1 217 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 TUBE1Q9UJT0 475 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 HPSEQ9Y251 543 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 UMODL1Q5DID0 1318 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 TANC1Q9C0D5 1861 aa9.7□□□□□ -0.86
CCDC90B-217ENST00000530253 SMIM35A0A1B0GVV1 85 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 KIAA0355O15063 1070 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 PRICKLE3O43900 615 aaPredicted RBP9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 EYA4O95677 639 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 CLTBP09497 229 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 ACRP10323 421 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 ITGA4P13612 1032 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 KLRC1P26715 233 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 MYH9P35579 1960 aaKnown RBP9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 UBA7P41226 1012 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 MAGEA10P43363 369 aaPredicted RBP9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 PRR5P85299 388 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 DRP2Q13474 957 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 ADALQ6DHV7 355 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 TRMT1LQ7Z2T5 733 aaKnown RBP9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 RPAINQ86UA6 219 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 FIBCD1Q8N539 461 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 CEP170P1Q96L14 293 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 NT5C3AQ9H0P0 336 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 DHX33Q9H6R0 707 aaKnown RBP9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 MYRFQ9Y2G1 1151 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 PCDHA2Q9Y5H9 948 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 COL6A3P12111 3177 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
CCDC90B-217ENST00000530253 TCHHQ07283 1943 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 SIP14410 1827 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 CHD9Q3L8U1 2897 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 FAM86C2PA6NEL3 165 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 PLA2G1BP04054 148 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 GNAT1P11488 350 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 CMA1P23946 247 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 ITGB8P26012 769 aa9.68□□□□□ -0.86
CCDC90B-217ENST00000530253 CLCN3P51790 818 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms