RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 TMLHEQ9NVH6 421 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 RALYQ9UKM9 306 aaKnown RBP17.3■□□□□ 0.36
COL16A1-216ENST00000529928 STYXL1Q9Y6J8 313 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 ATG2BQ96BY7 2078 aa17.3■□□□□ 0.36
COL16A1-216ENST00000529928 C1QTNF9BB2RNN3 333 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 TADA3O75528 432 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 IL18RAPO95256 599 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 CKMP06732 381 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 C1QTNF9P0C862 333 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 UBA7P41226 1012 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 IFNAR2P48551 515 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 GPR15P49685 360 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 ZNF252P-AS1Q0IIN9 211 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 NR1H3Q13133 447 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 ZNF77Q15935 545 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
COL16A1-216ENST00000529928 PMS2CLQ68D20 193 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 STKLD1Q8NE28 680 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 TSTD1Q8NFU3 115 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 TRPC7Q9HCX4 862 aa17.29■□□□□ 0.36
COL16A1-216ENST00000529928 TRAV19A0A0A6YYK7 116 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 TISP43B9A030 160 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 GIPC1O14908 333 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 KHNYNO15037 678 aaKnown RBP17.28■□□□□ 0.36
COL16A1-216ENST00000529928 NOL4O94818 638 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 CEACAM1P13688 526 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 USP4Q13107 963 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 DDR2Q16832 855 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 EML3Q32P44 896 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 SH3PXD2AQ5TCZ1 1133 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 SDHAF4Q5VUM1 108 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 EFCAB13Q8IY85 973 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 FSIP1Q8NA03 581 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 TTC16Q8NEE8 873 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 ACBD6Q9BR61 282 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 TMEM9BQ9NQ34 198 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 BLOC1S4Q9NUP1 217 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 ZMIZ1Q9ULJ6 1067 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 WNT6Q9Y6F9 365 aa17.28■□□□□ 0.36
COL16A1-216ENST00000529928 HUS1O60921 280 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 CSRP1P21291 193 aaKnown RBP17.27■□□□□ 0.36
COL16A1-216ENST00000529928 FOXC1Q12948 553 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 MCM6Q14566 821 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 POSTNQ15063 836 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 ZC2HC1CQ53FD0 456 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-216ENST00000529928 INTS6LQ5JSJ4 861 aaKnown RBP17.27■□□□□ 0.36
COL16A1-216ENST00000529928 CRELD2Q6UXH1 353 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-216ENST00000529928 TMEM86AQ8N2M4 240 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 PDCL2Q8N4E4 241 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 KDF1Q8NAX2 398 aaPredicted RBP17.27■□□□□ 0.36
COL16A1-216ENST00000529928 RASSF8Q8NHQ8 419 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 LRRC15Q8TF66 581 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 POMGNT1Q8WZA1 660 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 RAD54LQ92698 747 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 SLC22A12Q96S37 553 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 CYP2S1Q96SQ9 504 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 TPSD1Q9BZJ3 242 aa17.27■□□□□ 0.36
COL16A1-216ENST00000529928 DDX43Q9NXZ2 648 aaKnown RBP17.27■□□□□ 0.36
COL16A1-216ENST00000529928 KIAA1549LQ6ZVL6 1849 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 TMEM8BA6NDV4 472 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 TCF3P15923 654 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 CYP2F1P24903 491 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 MYL7Q01449 175 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 KCNB1Q14721 858 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 CFAP221Q4G0U5 840 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 CYP2U1Q7Z449 544 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 RASSF3Q86WH2 238 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 USP33Q8TEY7 942 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 HVCN1Q96D96 273 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 CNOT6LQ96LI5 555 aaKnown RBP17.26■□□□□ 0.35
COL16A1-216ENST00000529928 ADAM33Q9BZ11 813 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 L1RE1Q9UN81 338 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 WASF3Q9UPY6 502 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 INVSQ9Y283 1065 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 CEP295Q9C0D2 2601 aa17.26■□□□□ 0.35
COL16A1-216ENST00000529928 MYO16Q9Y6X6 1858 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 FRYQ5TBA9 3013 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 NFATC1O95644 943 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 PLCG1P19174 1290 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 POLR2BP30876 1174 aaKnown RBP17.25■□□□□ 0.35
COL16A1-216ENST00000529928 PDE6CP51160 858 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 TFAMQ00059 246 aaKnown RBP17.25■□□□□ 0.35
COL16A1-216ENST00000529928 ANO7Q6IWH7 933 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 SPATA2LQ8IUW3 424 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-216ENST00000529928 LRRC52Q8N7C0 313 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 ARL14EPQ8N8R7 260 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-216ENST00000529928 SPATA18Q8TC71 538 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 SH3RF2Q8TEC5 729 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
COL16A1-216ENST00000529928 FUBP3Q96I24 572 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL16A1-216ENST00000529928 PKMYT1Q99640 499 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 GTF3C4Q9UKN8 822 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 AGAP1Q9UPQ3 857 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 CACNA1GO43497 2377 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 NUP205Q92621 2012 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 FAM208BQ5VWN6 2430 aa17.25■□□□□ 0.35
COL16A1-216ENST00000529928 LAMA1P25391 3075 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 H3BQV1 296 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms