RNA–Protein interactions for RNA: ENST00000529922.1

AP001999.3-201, humanhuman

TSL 2 BASIC

Gene AP001999.3, Length 455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.3-201ENST00000529922 CCR3P51677 355 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 RPL10AP62906 217 aaKnown RBP9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 ASIC1P78348 528 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 FOXK2Q01167 660 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 BFSP1Q12934 665 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 CCINQ13939 588 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 ZNF268Q14587 947 aaPredicted RBP9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 DGKKQ5KSL6 1271 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 RESP18Q5W5W9 173 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 LMBRD2Q68DH5 695 aaPredicted RBP9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 TSSK4Q6SA08 328 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 TRAPPC11Q7Z392 1133 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 WDR49Q8IV35 697 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 C12orf56Q8IXR9 622 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 ADGRF2Q8IZF7 708 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 SPEM1Q8N4L4 309 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 DCLK2Q8N568 766 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 CSGALNACT1Q8TDX6 532 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 TMEM174Q8WUU8 243 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 USP13Q92995 863 aaPredicted RBP9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 HPDLQ96IR7 371 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 ANKRD36BP1Q96IX9 119 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 ZFYVE19Q96K21 471 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 GCNAQ96QF7 691 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 PI4K2AQ9BTU6 479 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 SMG9Q9H0W8 520 aaKnown RBP9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 ANK1P16157 1881 aa9.91□□□□□ -0.82
AP001999.3-201ENST00000529922 CEP295Q9C0D2 2601 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 UBE4BO95155 1302 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 SLC38A8A6NNN8 435 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 TACC1O75410 805 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 STAU1O95793 577 aaKnown RBP9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 TNNC2P02585 160 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 KRT19P08727 400 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 WARSP23381 471 aaKnown RBP9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 LMO2P25791 158 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CASP1P29466 404 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 HOXA6P31267 233 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 MAGEA11P43364 429 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 ID4P47928 161 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CXCL12P48061 93 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 KPNA1P52294 538 aaPredicted RBP9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 TNK2Q07912 1038 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 MYO1EQ12965 1108 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 PKP1Q13835 747 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 PSMD6Q15008 389 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 TAF12Q16514 161 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 SNRNP35Q16560 246 aaKnown RBP9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CCDC142Q17RM4 750 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 SDHAF4Q5VUM1 108 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 TXNDC8Q6A555 127 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 VSTM1Q6UX27 236 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 SYNPOQ8N3V7 929 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 XXYLT1Q8NBI6 393 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 RIN3Q8TB24 985 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CHFRQ96EP1 664 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CEP295NLQ96MC4 621 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CRTAC1Q9NQ79 661 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 HPS4Q9NQG7 708 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 GKN1Q9NS71 199 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 TDP1Q9NUW8 608 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 THG1LQ9NWX6 298 aaKnown RBP9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CGNQ9P2M7 1197 aaKnown RBP9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CDH9Q9ULB4 789 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 CCL26Q9Y258 94 aa9.9□□□□□ -0.82
AP001999.3-201ENST00000529922 GON4LQ3T8J9 2241 aa9.9□□□□□ -0.83
AP001999.3-201ENST00000529922 OTOL1A6NHN0 477 aaPredicted RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 K7ESF4 209 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 TRDMT1O14717 391 aaKnown RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 KLRC4O43908 158 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 ATP2C2O75185 946 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 SLFN14P0C7P3 912 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 TGM1P22735 817 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 AVPR1AP37288 418 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 NRLP54845 237 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 SATB1Q01826 763 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 CUL4BQ13620 913 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 LRRC32Q14392 662 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 MAPRE1Q15691 268 aaKnown RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 ITPRIPL2Q3MIP1 535 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 C4orf50Q6ZRC1 276 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 HS2ST1Q7LGA3 356 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 ERMP1Q7Z2K6 904 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 HSCBQ8IWL3 235 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 MAB21L3Q8N8X9 362 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 FOXD4L4Q8WXT5 416 aaPredicted RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 MRPS31Q92665 395 aaKnown RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 RNF25Q96BH1 459 aaPredicted RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 RMDN1Q96DB5 314 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 SPATA17Q96L03 361 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 CGRRF1Q99675 332 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 SYT15Q9BQS2 421 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 XYLT2Q9H1B5 865 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 BLZF1Q9H2G9 400 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 KIF9Q9HAQ2 790 aa9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 RBM12Q9NTZ6 932 aaKnown RBP9.89□□□□□ -0.83
AP001999.3-201ENST00000529922 C2orf42Q9NWW7 574 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms