RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 KARSQ15046 597 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ZRSR1Q15695 479 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 COL28A1Q2UY09 1125 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SOWAHCQ53LP3 525 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 C2orf27AQ580R0 203 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 TRIM61Q5EBN2 209 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CC2D1AQ6P1N0 951 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 TMEM150AQ86TG1 271 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ITIH5Q86UX2 942 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 KRTAP1-3Q8IUG1 177 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SFTPA1Q8IWL2 248 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 TMEFF1Q8IYR6 380 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CAMKK1Q8N5S9 505 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 DEFB119Q8N690 84 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ERMNQ8TAM6 284 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 COL26A1Q96A83 441 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ERLEC1Q96DZ1 483 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ARID3AQ99856 593 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 GTPBP2Q9BX10 602 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 HAPLN2Q9GZV7 340 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 OBP2AQ9NY56 170 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ABI2Q9NYB9 513 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ARHGAP28Q9P2N2 729 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 MBD1Q9UIS9 605 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ASB3Q9Y575 518 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 NUP210Q8TEM1 1887 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 LACTBL1A8MY62 500 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 REC8O95072 547 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CFIP05156 583 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ODC1P11926 461 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 HNRNPLP14866 589 aaKnown RBP eCLIP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ENGP17813 658 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 DRD1P21728 446 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CDC25AP30304 524 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 AARSP49588 968 aaKnown RBP eCLIP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 MAPK7Q13164 816 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 MTF1Q14872 753 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 PTPAQ15257 358 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CCDC142Q17RM4 750 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 USP39Q53GS9 565 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ARMCX5Q6P1M9 558 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SYT13Q7L8C5 426 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 PDZD3Q86UT5 571 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 PNPLA1Q8N8W4 532 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SPRYD3Q8NCJ5 442 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 MDGA1Q8NFP4 955 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SNX29Q8TEQ0 813 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 WASF1Q92558 559 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CD101Q93033 1021 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ACDQ96AP0 544 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 BICD1Q96G01 975 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SENP8Q96LD8 212 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 CAMK1GQ96NX5 476 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 BBC3Q96PG8 261 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 SLC22A12Q96S37 553 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ECT2Q9H8V3 914 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 TMEM74BQ9NUR3 256 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 TDP1Q9NUW8 608 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 MAFFQ9ULX9 164 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 UBQLN1Q9UMX0 589 aaKnown RBP3.82□□□□□ -1.8
PTPRC-213ENST00000529828 MSRB2Q9Y3D2 182 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 NEUROG3Q9Y4Z2 214 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ACACAQ13085 2346 aa3.82□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF462Q96JM2 2506 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 NPHP3-ACAD11A0A0J9YXS1 232 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CLDN3O15551 220 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TADA3O75528 432 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TOM1L1O75674 476 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 FGF19O95750 216 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CKMP06732 381 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 NFICP08651 508 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 HMGA1P17096 107 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 LRPAP1P30533 357 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 IFNAR2P48551 515 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 NLRP12P59046 1061 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PPP2R3AQ06190 1150 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 MESP2Q0VG99 397 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 SCAPQ12770 1279 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 STRN3Q13033 797 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 TRIM29Q14134 588 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 MYBPC2Q14324 1141 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ENOX2Q16206 610 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 DDR2Q16832 855 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ZC2HC1CQ53FD0 456 aaPredicted RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 HAUS3Q68CZ6 603 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 JADE1Q6IE81 842 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 KCNK18Q7Z418 384 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 LRRTM3Q86VH5 581 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PROSER1Q86XN7 944 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 EFCAB13Q8IY85 973 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CPA6Q8N4T0 437 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 NSUN7Q8NE18 718 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 MDM1Q8TC05 714 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 HNRNPLLQ8WVV9 542 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 CYP2S1Q96SQ9 504 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PLIN2Q99541 437 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 PI4K2AQ9BTU6 479 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 NUSAP1Q9BXS6 441 aaKnown RBP3.81□□□□□ -1.8
PTPRC-213ENST00000529828 ZCWPW1Q9H0M4 648 aa3.81□□□□□ -1.8
PTPRC-213ENST00000529828 SLC32A1Q9H598 525 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms