RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 PCMTD1Q96MG8 357 aaPredicted RBP15.31■□□□□ 0.04
UBXN1-209ENST00000528907 HNRNPABQ99729 332 aaKnown RBP15.31■□□□□ 0.04
UBXN1-209ENST00000528907 ZDHHC7Q9NXF8 308 aa15.31■□□□□ 0.04
UBXN1-209ENST00000528907 FOXN3O00409 490 aaPredicted RBP15.3■□□□□ 0.04
UBXN1-209ENST00000528907 ZMYND10O75800 440 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 CSPG5O95196 566 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 HNRNPA1P09651 372 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBXN1-209ENST00000528907 HAPLN1P10915 354 aaPredicted RBP15.3■□□□□ 0.04
UBXN1-209ENST00000528907 EPCAMP16422 314 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 HOXB8P17481 243 aaPredicted RBP15.3■□□□□ 0.04
UBXN1-209ENST00000528907 GTF2F1P35269 517 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBXN1-209ENST00000528907 ARPP19P56211 112 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 BPIFB4P59827 614 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 ADCY1Q08828 1119 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 STILQ15468 1287 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 ARHGAP44Q17R89 818 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 MDH1BQ5I0G3 518 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 PAQR9Q6ZVX9 377 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 SPATA2LQ8IUW3 424 aaPredicted RBP15.3■□□□□ 0.04
UBXN1-209ENST00000528907 VSTM4Q8IW00 320 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 FUKQ8N0W3 1084 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 BAP1Q92560 729 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 CYFIP2Q96F07 1278 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 B3GNT5Q9BYG0 378 aa15.3■□□□□ 0.04
UBXN1-209ENST00000528907 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.045e-7■□□□□ 10.9
UBXN1-209ENST00000528907 PRRC2BQ5JSZ5 2229 aaKnown RBP15.29■□□□□ 0.04
UBXN1-209ENST00000528907 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 PATJQ8NI35 1801 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 ATP8B3O60423 1300 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
UBXN1-209ENST00000528907 SEC24AO95486 1093 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 ELF1P32519 619 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 CLCN1P35523 988 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 SOX5P35711 763 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 STAT1P42224 750 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 PLD1Q13393 1074 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 RAPGEF1Q13905 1077 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 TRIM14Q14142 442 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 CNGA2Q16280 664 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 ZNF394Q53GI3 561 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 SGO2Q562F6 1265 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 LIN9Q5TKA1 542 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 SPECC1LQ69YQ0 1117 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 ATAD1Q8NBU5 361 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 HEXIM2Q96MH2 286 aaKnown RBP15.29■□□□□ 0.04
UBXN1-209ENST00000528907 PGLYRP2Q96PD5 576 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 SPAG5Q96R06 1193 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 TRIM5Q9C035 493 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 CRISPLD1Q9H336 500 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 SFXN1Q9H9B4 322 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 CSNK1G1Q9HCP0 422 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 MAN1C1Q9NR34 630 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
UBXN1-209ENST00000528907 C8AP07357 584 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 LTBRP36941 435 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 ZNF75DP51815 510 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 PTK2Q05397 1052 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 DUSP4Q13115 394 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 ARID5BQ14865 1188 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 PPP1R26Q5T8A7 1209 aaPredicted RBP15.28■□□□□ 0.04
UBXN1-209ENST00000528907 ANKRD54Q6NXT1 300 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 LCLAT1Q6UWP7 414 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 CACNA2D4Q7Z3S7 1137 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 FAM35AQ86V20 835 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 C12orf29Q8N999 325 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 ADAMTS19Q8TE59 1207 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 SMARCD1Q96GM5 515 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 C8orf48Q96LL4 319 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 ASB2Q96Q27 587 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 UBXN6Q9BZV1 441 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 NUCKS1Q9H1E3 243 aaKnown RBP15.28■□□□□ 0.04
UBXN1-209ENST00000528907 IGFLR1Q9H665 355 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 CYP4F11Q9HBI6 524 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 PNPLA8Q9NP80 782 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 ABI2Q9NYB9 513 aaPredicted RBP15.28■□□□□ 0.04
UBXN1-209ENST00000528907 CLEC1BQ9P126 229 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 INSL5Q9Y5Q6 135 aa15.28■□□□□ 0.04
UBXN1-209ENST00000528907 GREB1Q4ZG55 1949 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 O00370 1275 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 TRIM66O15016 1216 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 LINC01565O15544 149 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 MED7O43513 233 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 KRT5P13647 590 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 GNA15P30679 374 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 RPL10AP62906 217 aaKnown RBP15.27■□□□□ 0.04
UBXN1-209ENST00000528907 CYP27A1Q02318 531 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 ORC1Q13415 861 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 CCDC142Q17RM4 750 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 PKDCCQ504Y2 493 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 ANKRD52Q8NB46 1076 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 SLC7A14Q8TBB6 771 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 SLC2A14Q8TDB8 520 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 ZNF606Q8WXB4 792 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 SYN2Q92777 582 aaPredicted RBP15.27■□□□□ 0.04
UBXN1-209ENST00000528907 MSLNLQ96KJ4 702 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 SPATA17Q96L03 361 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 LPIN3Q9BQK8 851 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 ZSWIM1Q9BR11 485 aa15.27■□□□□ 0.04
UBXN1-209ENST00000528907 ZNF518BQ9C0D4 1074 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms