RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 SLC4A11Q8NBS3 891 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ACTL9Q8TC94 416 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 PRPF31Q8WWY3 499 aaKnown RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 SEPT1Q8WYJ6 367 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ZNF75CPQ92670 426 aaPredicted RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 UTP4Q969X6 686 aaKnown RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 STAMBPL1Q96FJ0 436 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 C2orf40Q9H1Z8 148 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 VPS11Q9H270 941 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 FZD8Q9H461 694 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ACSS3Q9H6R3 686 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 TLE6Q9H808 572 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 VPS37BQ9H9H4 285 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 SAR1AQ9NR31 198 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 KLHL11Q9NVR0 708 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 NOP53Q9NZM5 478 aaKnown RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 PIM2Q9P1W9 311 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 ANKFY1Q9P2R3 1169 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.8□□□□□ -1
CSTF3-208ENST00000528865 AFG3L2Q9Y4W6 797 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 CEP83Q9Y592 693 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 DOCK1Q14185 1865 aa8.8□□□□□ -1
CSTF3-208ENST00000528865 MYH9P35579 1960 aaKnown RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 TTLL13PA6NNM8 815 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 E7ENQ6 273 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 SGK1O00141 431 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 ACKR2O00590 384 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 TM9SF1O15321 606 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 CST8O60676 142 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 HNRNPCL1O60812 293 aaKnown RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 LRCH4O75427 683 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 TRUB2O95900 331 aaKnown RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 DHRS4L1P0CG22 281 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 KRT3P12035 628 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 KRT15P19012 456 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 IL1R2P27930 398 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 STIP1P31948 543 aaKnown RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 RFC1P35251 1148 aaPredicted RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 PCK1P35558 622 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 GMPSP49915 693 aaPredicted RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 LACTBP83111 547 aaPredicted RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 OTUD4Q01804 1114 aaKnown RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 MYO1EQ12965 1108 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 DNAJC3Q13217 504 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 TRPC3Q13507 836 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 MXD4Q14582 209 aaPredicted RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 CRYMQ14894 314 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 ZKSCAN8Q15776 578 aaPredicted RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 HIF1AQ16665 826 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 ACCSLQ4AC99 568 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 MSS51Q4VC12 460 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 SEZ6Q53EL9 994 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 WASHC2DQ5SRD0 308 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 FNBP1LQ5T0N5 605 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 HHATQ5VTY9 493 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 ANKRD22Q5VYY1 191 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 LBX2Q6XYB7 198 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 FAM47EQ6ZV65 393 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 SH2D5Q6ZV89 423 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 OTOAQ7RTW8 1153 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 PLPPR4Q7Z2D5 763 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 SAMD7Q7Z3H4 446 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 MICALL2Q8IY33 904 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 ZBED8Q8IZ13 594 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 KIF2BQ8N4N8 673 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 BANPQ8N9N5 519 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 JOSD2Q8TAC2 188 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 LRRC8CQ8TDW0 803 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 DCAKDQ8WVC6 231 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 SLC7A6OSQ96CW6 309 aaPredicted RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 KLRG1Q96E93 195 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 MCRS1Q96EZ8 462 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 WDR83Q9BRX9 315 aaKnown RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 TMEM121Q9BTD3 319 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 TUBB6Q9BUF5 446 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 BCO2Q9BYV7 579 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 MTMR12Q9C0I1 747 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 FAM124BQ9H5Z6 455 aaPredicted RBP8.79□□□□□ -1
CSTF3-208ENST00000528865 VRTNQ9H8Y1 702 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 PNPLA8Q9NP80 782 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 BATF3Q9NR55 127 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 CYTH4Q9UIA0 394 aa8.79□□□□□ -1
CSTF3-208ENST00000528865 SSC5DA1L4H1 1573 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 LCTP09848 1927 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 COL11A1P12107 1806 aaPredicted RBP8.78□□□□□ -1
CSTF3-208ENST00000528865 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 APOC4-APOC2K7ER74 178 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 FZD9O00144 591 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 IL18RAPO95256 599 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 TGDSO95455 350 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 ITGBL1O95965 494 aaPredicted RBP8.78□□□□□ -1
CSTF3-208ENST00000528865 TNNC2P02585 160 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 APOC2P02655 101 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 PRKCBP05771 671 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 CA4P22748 312 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 RXRBP28702 533 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 CTCFP49711 727 aaPredicted RBP8.78□□□□□ -1
CSTF3-208ENST00000528865 RAD23BP54727 409 aa8.78□□□□□ -1
CSTF3-208ENST00000528865 GDF10P55107 478 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms