RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 LILRA6Q6PI73 481 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 BEND5Q7L4P6 421 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RRAGAQ7L523 313 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 ARCQ7LC44 396 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 TMC6Q7Z403 805 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 TMEM173Q86WV6 379 aaPredicted RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 ARHGEF19Q8IW93 802 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 ZNF276Q8N554 614 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 TC2NQ8N9U0 490 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 SLC4A11Q8NBS3 891 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 LEMD2Q8NC56 503 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RBBP8NLQ8NC74 664 aaPredicted RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 EPS8L1Q8TE68 723 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RIN2Q8WYP3 895 aaPredicted RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 KCTD13Q8WZ19 329 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 CYFIP2Q96F07 1278 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 TRIM11Q96F44 468 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 SMARCD1Q96GM5 515 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 SPATA17Q96L03 361 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 C8orf48Q96LL4 319 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 TCF25Q9BQ70 676 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 SYT15Q9BQS2 421 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 MRPL45Q9BRJ2 306 aaKnown RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 C17orf80Q9BSJ5 609 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 ABHD10Q9NUJ1 306 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 ZDHHC7Q9NXF8 308 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 WDR35Q9P2L0 1181 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 INTUQ9ULD6 942 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 PCDHB5Q9Y5E4 795 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 PCDHB4Q9Y5E5 795 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 NCANO14594 1321 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 CLUHO75153 1309 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 FAM92AA1XBS5 289 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 LRRC53A6NM62 1247 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 GRXCR1A8MXD5 290 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 RBAK-RBAKDNI3L0D1 243 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 O00370 1275 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 MICAL2O94851 1124 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 CLSTN1O94985 981 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 IPO7O95373 1038 aaKnown RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 LCA5LO95447 670 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 GLI1P08151 1106 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 MYBL1P10243 752 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 KRT5P13647 590 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 IBSPP21815 317 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 ELF1P32519 619 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 PLA2G4AP47712 749 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 FXR1P51114 621 aaKnown RBP eCLIP6.59□□□□□ -1.35
MACF1-228ENST00000528611 CDH8P55286 799 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 ROR1Q01973 937 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 KLHL30Q0D2K2 578 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 BST2Q10589 180 aaKnown RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 LRMPQ12912 555 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 MTA1Q13330 715 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 CAMK1Q14012 370 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 ASIC2Q16515 512 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 ARHGAP44Q17R89 818 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 PKDCCQ504Y2 493 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 ZNF662Q6ZS27 426 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 TMCO2Q7Z6W1 182 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 ITIH5Q86UX2 942 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 CEP57Q86XR8 500 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 SPATA2LQ8IUW3 424 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 KIAA1958Q8N8K9 716 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 TMEM35BQ8NCS4 154 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 C1orf131Q8NDD1 294 aaKnown RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 CMASQ8NFW8 434 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 BCL7CQ8WUZ0 217 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 SLC35F5Q8WV83 523 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 OVCA2Q8WZ82 227 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 DDX1Q92499 740 aaKnown RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 CASP10Q92851 521 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 RNF25Q96BH1 459 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 MYRFLQ96LU7 910 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 CCDC42Q96M95 316 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 HEXIM2Q96MH2 286 aaKnown RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 KLHL5Q96PQ7 755 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 NCAPGQ9BPX3 1015 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 RTP3Q9BQQ7 232 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 CLSTN3Q9BQT9 956 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 SYT11Q9BT88 431 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 VN1R3Q9BXE9 311 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 DUSP16Q9BY84 665 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 SDCBP2Q9H190 292 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 NKX2-4Q9H2Z4 354 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 FBXO44Q9H4M3 255 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 NSUN3Q9H649 340 aaKnown RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 SMYD3Q9H7B4 428 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 NLRC4Q9NPP4 1024 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 AVENQ9NQS1 362 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 ENTPD7Q9NQZ7 604 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 DZANK1Q9NVP4 752 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 IL37Q9NZH6 218 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 UXTQ9UBK9 157 aaPredicted RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 NOCTQ9UK39 431 aaKnown RBP6.59□□□□□ -1.35
MACF1-228ENST00000528611 STRIP2Q9ULQ0 834 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 POLIQ9UNA4 740 aa6.59□□□□□ -1.35
MACF1-228ENST00000528611 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.59□□□□□ -1.35
MACF1-228ENST00000528611 CDY1Q9Y6F8 540 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms