RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TBC1D30Q9Y2I9 924 aa7.09□□□□□ -1.27
PCF11-202ENST00000528336 EPN1Q9Y6I3 576 aaPredicted RBP7.09□□□□□ -1.27
PCF11-202ENST00000528336 hCG_1984214I3L0E3 225 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 CENPBP07199 599 aaPredicted RBP7.08□□□□□ -1.28
PCF11-202ENST00000528336 PLA2G5P39877 138 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 SEC24CP53992 1094 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 KRT17Q04695 432 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 FOXI1Q12951 378 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 MPP3Q13368 585 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 HLTFQ14527 1009 aaKnown RBP eCLIP7.08□□□□□ -1.28
PCF11-202ENST00000528336 SAFBQ15424 915 aaKnown RBP eCLIP7.08□□□□□ -1.28
PCF11-202ENST00000528336 DCAF12L1Q5VU92 463 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 SESTD1Q86VW0 696 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 LDLRAD3Q86YD5 345 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 ZNF280BQ86YH2 543 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 MYCBPAPQ8TBZ2 947 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 PMM1Q92871 262 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 COQ10AQ96MF6 247 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 OSBPL9Q96SU4 736 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 ACTRT3Q9BYD9 372 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 A1CFQ9NQ94 594 aaKnown RBP7.08□□□□□ -1.28
PCF11-202ENST00000528336 CORO2BQ9UQ03 480 aa7.08□□□□□ -1.28
PCF11-202ENST00000528336 MRPS17Q9Y2R5 130 aaKnown RBP7.08□□□□□ -1.28
PCF11-202ENST00000528336 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.08□□□□□ -1.28
PCF11-202ENST00000528336 HMGXB3Q12766 1538 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 MAST3O60307 1309 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 TRIM43BA6NCK2 446 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 HMGB1P1B2RPK0 211 aaPredicted RBP7.07□□□□□ -1.28
PCF11-202ENST00000528336 ESRRBO95718 433 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 GCP02774 474 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 CHRM2P08172 466 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 CYP2C9P11712 490 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 TGM1P22735 817 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 MPLP40238 635 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 LOXL3P58215 753 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 RPS16P62249 146 aaKnown RBP7.07□□□□□ -1.28
PCF11-202ENST00000528336 PURAQ00577 322 aaKnown RBP7.07□□□□□ -1.28
PCF11-202ENST00000528336 ARHGAP40Q5TG30 622 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 MRGPRGQ86SM5 289 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 AMER2Q8N7J2 671 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 PJA1Q8NG27 643 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 OR56A3Q8NH54 315 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 TRIM43Q96BQ3 446 aaPredicted RBP7.07□□□□□ -1.28
PCF11-202ENST00000528336 FAM136AQ96C01 138 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 PTDSS2Q9BVG9 487 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 STK31Q9BXU1 1019 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 ZSCAN32Q9NX65 697 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 COL20A1Q9P218 1284 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 SERTAD3Q9UJW9 196 aa7.07□□□□□ -1.28
PCF11-202ENST00000528336 SALL3Q9BXA9 1300 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 BAZ1BQ9UIG0 1483 aaKnown RBP7.06□□□□□ -1.28
PCF11-202ENST00000528336 RHPN2P1A8MT19 583 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 PPM1DO15297 605 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 PMM2O15305 246 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 RASSF9O75901 435 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 PDHA1P08559 390 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 MYL3P08590 195 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 XRCC6P12956 609 aaKnown RBP eCLIP7.06□□□□□ -1.28
PCF11-202ENST00000528336 PIK3CBP42338 1070 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 INHBCP55103 352 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 MRPS35P82673 323 aaKnown RBP7.06□□□□□ -1.28
PCF11-202ENST00000528336 SATB1Q01826 763 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 DPTQ07507 201 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 PLA1AQ53H76 456 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 MICU3Q86XE3 530 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 TFAP2BQ92481 460 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 NMD3Q96D46 503 aaKnown RBP7.06□□□□□ -1.28
PCF11-202ENST00000528336 NELL2Q99435 816 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 MESP1Q9BRJ9 268 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 ARNT2Q9HBZ2 717 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 TERF2IPQ9NYB0 399 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 PACSIN3Q9UKS6 424 aa7.06□□□□□ -1.28
PCF11-202ENST00000528336 PYCARD-AS1I3L0S3 204 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 CREB3O43889 395 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 MYL1P05976 194 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 RHOP08100 348 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 NBPF7P0C2Y1 421 aaPredicted RBP7.05□□□□□ -1.28
PCF11-202ENST00000528336 ADRA1BP35368 520 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 FOLR3P41439 243 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 WNT3P56703 355 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 TGFB2P61812 414 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 ITIH3Q06033 890 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 EIF2B5Q13144 721 aaKnown RBP7.05□□□□□ -1.28
PCF11-202ENST00000528336 MGAT5BQ3V5L5 792 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 RGS7BPQ6MZT1 257 aaPredicted RBP7.05□□□□□ -1.28
PCF11-202ENST00000528336 ZDHHC24Q6UX98 284 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 KRT78Q8N1N4 520 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 PHKBQ93100 1093 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 PGBD1Q96JS3 809 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 SORCS2Q96PQ0 1159 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 TBCBQ99426 244 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 IKZF4Q9H2S9 585 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 LRIT1Q9P2V4 623 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 ITGB1BP2Q9UKP3 347 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 HDAC9Q9UKV0 1011 aa7.05□□□□□ -1.28
PCF11-202ENST00000528336 NDRG4Q9ULP0 352 aaKnown RBP7.05□□□□□ -1.28
PCF11-202ENST00000528336 WIZO95785 1651 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 A0A087X1B8 175 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 SLC5A1P13866 664 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 NXPH1P58417 271 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms