RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 NFX1Q12986 1120 aaKnown RBP18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 TRIM32Q13049 653 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 MTMR3Q13615 1198 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 C9orf57Q5W0N0 161 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 ACOT1Q86TX2 421 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 MAIP1Q8WWC4 291 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 DCLK3Q9C098 648 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 TSPAN16Q9UKR8 245 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 ATP8A1Q9Y2Q0 1164 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 SMIM28A0A1B0GU29 152 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 CYBAP13498 195 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 ATF7P17544 494 aaPredicted RBP18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 HOXC8P31273 242 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 FLT3LGP49771 235 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 DRG2P55039 364 aaKnown RBP18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 ADCY2Q08462 1091 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 SKIDA1Q1XH10 827 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 CCDC114Q96M63 670 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 GOLGA2P5Q9HBQ8 144 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 FAM49BQ9NUQ9 324 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 NME7Q9Y5B8 376 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 SCN1AP35498 2009 aa18.23■□□□□ 0.51
PCDHA6-202ENST00000527624 HCRTO43612 131 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 MYZAPP0CAP1 466 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 TM4SF4P48230 202 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 ZNF844Q08AG5 666 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 TRIP13Q15645 432 aaPredicted RBP18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 GOLGA7BQ2TAP0 167 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 MFSD14CQ5VZR4 134 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 MFSD7Q6UXD7 560 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 RAPGEF5Q92565 580 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 SLITRK1Q96PX8 696 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 UBQLN1Q9UMX0 589 aaKnown RBP18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 IPPQ9Y573 584 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 CCT5P48643 541 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 SMTNL2Q2TAL5 461 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 NBPF20Q3BBV1 942 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 ODF2Q5BJF6 829 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 FAM47CQ5HY64 1035 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 TWF2Q6IBS0 349 aaKnown RBP18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 LCLAT1Q6UWP7 414 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 FAM228AQ86W67 206 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 RCOR2Q8IZ40 523 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 LRRC52Q8N7C0 313 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 NIPA2Q8N8Q9 360 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 ARRDC4Q8NCT1 418 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 LPIN3Q9BQK8 851 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 ZWILCHQ9H900 591 aa18.22■□□□□ 0.51
PCDHA6-202ENST00000527624 LRRD1A4D1F6 860 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 CTSHP09668 335 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 RGS7P49802 495 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 PRKCZQ05513 592 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 SOWAHAQ2M3V2 549 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 PPP1R26Q5T8A7 1209 aaPredicted RBP18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 FAM102AQ5T9C2 384 aaPredicted RBP18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 LRRC38Q5VT99 294 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 NME8Q8N427 588 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 TTC39CQ8N584 583 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 ARFGAP1Q8N6T3 406 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 SMG8Q8ND04 991 aaKnown RBP18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 OR6B3Q8NGW1 331 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 RBM41Q96IZ5 413 aaKnown RBP18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 MTG1Q9BT17 334 aaPredicted RBP18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 ASIC3Q9UHC3 531 aa18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 FEZ2Q9UHY8 353 aaPredicted RBP18.21■□□□□ 0.51
PCDHA6-202ENST00000527624 TRIM66O15016 1216 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 PPFIA2O75334 1257 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 LRCH4O75427 683 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 PFKMP08237 780 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 GJA9P57773 515 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 SOX4Q06945 474 aaPredicted RBP18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 ZNF268Q14587 947 aaPredicted RBP18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 KCNT1Q5JUK3 1230 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 CYP4F22Q6NT55 531 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 TAF2Q6P1X5 1199 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 IPO4Q8TEX9 1081 aaKnown RBP18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 SLCO2A1Q92959 643 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 WNT8BQ93098 351 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 TSPYL1Q9H0U9 437 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 DPEP3Q9H4B8 488 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 RABEP2Q9H5N1 569 aa18.21■□□□□ 0.5
PCDHA6-202ENST00000527624 E5RJQ4 531 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 SPTLC1O15269 473 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 IL1R2P27930 398 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 CETN2P41208 172 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 GABRB2P47870 512 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 VPS41P49754 854 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 GUCY1A3Q02108 690 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 GDF6Q6KF10 455 aaPredicted RBP18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 SPOCD1Q6ZMY3 1216 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 MCRS1Q96EZ8 462 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 PIWIL1Q96J94 861 aaKnown RBP18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 TXLNGYQ9BZA5 131 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 GTF2IRD1Q9UHL9 959 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 KIAA1257Q9ULG3 409 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 CDY2AQ9Y6F7 541 aa18.2■□□□□ 0.5
PCDHA6-202ENST00000527624 LSP1P33241 339 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms