RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 TTC39CQ8N584 583 aa15.35■□□□□ 0.05
NXF1-204ENST00000527064 GPT2Q8TD30 523 aa15.35■□□□□ 0.05
NXF1-204ENST00000527064 TCEAL4Q96EI5 215 aa15.35■□□□□ 0.05
NXF1-204ENST00000527064 PCED1BQ96HM7 432 aa15.35■□□□□ 0.05
NXF1-204ENST00000527064 SRRTQ9BXP5 876 aaKnown RBP15.35■□□□□ 0.05
NXF1-204ENST00000527064 ELOVL4Q9GZR5 314 aa15.35■□□□□ 0.05
NXF1-204ENST00000527064 DPEP3Q9H4B8 488 aa15.35■□□□□ 0.05
NXF1-204ENST00000527064 FAM124BQ9H5Z6 455 aaPredicted RBP15.35■□□□□ 0.05
NXF1-204ENST00000527064 APOBEC3GQ9HC16 384 aaKnown RBP15.35■□□□□ 0.05
NXF1-204ENST00000527064 UXTQ9UBK9 157 aaPredicted RBP15.35■□□□□ 0.05
NXF1-204ENST00000527064 PMM2O15305 246 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 GPR37L1O60883 481 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 CCR2P41597 374 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 CDR1P51861 262 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 MARSP56192 900 aaKnown RBP15.34■□□□□ 0.05
NXF1-204ENST00000527064 NLRP12P59046 1061 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 INCA1Q0VD86 236 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 TPD52L1Q16890 204 aaPredicted RBP15.34■□□□□ 0.05
NXF1-204ENST00000527064 CCDC142Q17RM4 750 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 GIPC2Q8TF65 315 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 ELMO3Q96BJ8 720 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 LRRC3Q9BY71 257 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 SDCBP2Q9H190 292 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 SLITRK6Q9H5Y7 841 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.34■□□□□ 0.05
NXF1-204ENST00000527064 EHD2Q9NZN4 543 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 ZMYM5Q9UJ78 669 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 DUSP12Q9UNI6 340 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 COQ4Q9Y3A0 265 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 NUMBLQ9Y6R0 609 aa15.34■□□□□ 0.05
NXF1-204ENST00000527064 NOTCH4Q99466 2003 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 A0A1W2PRU2 124 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 P4HA2O15460 535 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 BDNFP23560 247 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 GABRR2P28476 465 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 GRIK1P39086 918 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 FMO5P49326 533 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 NDST1P52848 882 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 TEAD2Q15562 447 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 DPCR1Q3MIW9 517 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 CT47A1Q5JQC4 288 aaPredicted RBP15.33■□□□□ 0.04
NXF1-204ENST00000527064 TRIM67Q6ZTA4 783 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 SCN4BQ8IWT1 228 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 SHKBP1Q8TBC3 707 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 SEMA4DQ92854 862 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 MCRS1Q96EZ8 462 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 SPATA17Q96L03 361 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 ATXN3LQ9H3M9 355 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 NME7Q9Y5B8 376 aa15.33■□□□□ 0.04
NXF1-204ENST00000527064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
NXF1-204ENST00000527064 DOCK8Q8NF50 2099 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 PRR33A8MZF0 331 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 MOSPD3O75425 235 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 ECI2O75521 394 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 NOL4O94818 638 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 ERCC5P28715 1186 aaPredicted RBP15.32■□□□□ 0.04
NXF1-204ENST00000527064 GPR15P49685 360 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 YWHAEP62258 255 aaKnown RBP15.32■□□□□ 0.04
NXF1-204ENST00000527064 DDR2Q16832 855 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 PARM1Q6UWI2 310 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 RBM43Q6ZSC3 357 aaKnown RBP15.32■□□□□ 0.04
NXF1-204ENST00000527064 FAM114A1Q8IWE2 563 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 TRIM59Q8IWR1 403 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 GPR152Q8TDT2 470 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 RSAD2Q8WXG1 361 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 FGF14Q92915 247 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 SMARCD2Q92925 531 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 ELSPBP1Q96BH3 223 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 TRMT2BQ96GJ1 504 aaKnown RBP15.32■□□□□ 0.04
NXF1-204ENST00000527064 SMARCD1Q96GM5 515 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 C8orf48Q96LL4 319 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 MED10Q9BTT4 135 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 NT5C1AQ9BXI3 368 aa15.32■□□□□ 0.04
NXF1-204ENST00000527064 ZNF334Q9HCZ1 680 aaPredicted RBP15.32■□□□□ 0.04
NXF1-204ENST00000527064 MAGED2Q9UNF1 606 aaPredicted RBP15.32■□□□□ 0.04
NXF1-204ENST00000527064 FAM86C2PA6NEL3 165 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 TMEM221A6NGB7 291 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 M0R296 226 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 CILPO75339 1184 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 AFPP02771 609 aaKnown RBP15.31■□□□□ 0.04
NXF1-204ENST00000527064 SRFP11831 508 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 HMGA1P17096 107 aaKnown RBP15.31■□□□□ 0.04
NXF1-204ENST00000527064 GJA1P17302 382 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 CD58P19256 250 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 TBXAS1P24557 533 aaPredicted RBP15.31■□□□□ 0.04
NXF1-204ENST00000527064 DDX6P26196 483 aaKnown RBP eCLIP15.31■□□□□ 0.04
NXF1-204ENST00000527064 CCDC183Q5T5S1 534 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 SDHAF4Q5VUM1 108 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 GAREM2Q75VX8 874 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 ACOT1Q86TX2 421 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 CRYBG2Q8N1P7 616 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 SLC44A3Q8N4M1 653 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 E2F7Q96AV8 911 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 CNOT6LQ96LI5 555 aaKnown RBP15.31■□□□□ 0.04
NXF1-204ENST00000527064 MYRFLQ96LU7 910 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 ASB16Q96NS5 453 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 B3GNT5Q9BYG0 378 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 ZNF518BQ9C0D4 1074 aa15.31■□□□□ 0.04
NXF1-204ENST00000527064 THAP9Q9H5L6 903 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms