RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 YIPF1Q9Y548 306 aa13.77□□□□□ -0.21
SMPD1-202ENST00000526280 CUL9Q8IWT3 2517 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 LGALS16A8MUM7 142 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 XYLBO75191 536 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 SOAT2O75908 522 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 LRG1P02750 347 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 ACO1P21399 889 aaKnown RBP13.76□□□□□ -0.21
SMPD1-202ENST00000526280 MTHFRP42898 656 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 MAGEA11P43364 429 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 ALDH1A3P47895 512 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 KCNQ1P51787 676 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 CYP27A1Q02318 531 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 TWF1Q12792 350 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 ORC1Q13415 861 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 SMAD2Q15796 467 aaKnown RBP13.76□□□□□ -0.21
SMPD1-202ENST00000526280 MGAT5BQ3V5L5 792 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 FKBP15Q5T1M5 1219 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 JAKMIP2Q96AA8 810 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 RIPOR3Q96MK2 946 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 KREMEN1Q96MU8 473 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 NECTIN4Q96NY8 510 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 SEPT5Q99719 369 aaPredicted RBP13.76□□□□□ -0.21
SMPD1-202ENST00000526280 B3GNT5Q9BYG0 378 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 PIDD1Q9HB75 910 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 SIX2Q9NPC8 291 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 APEX2Q9UBZ4 518 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 FAM50BQ9Y247 325 aa13.76□□□□□ -0.21
SMPD1-202ENST00000526280 C2orf16Q68DN1 1984 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 DOCK6Q96HP0 2047 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 C5orf42Q9H799 3197 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 BMP1P13497 986 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 TRIM21P19474 475 aaKnown RBP13.75□□□□□ -0.21
SMPD1-202ENST00000526280 BDNFP23560 247 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 RAD23BP54727 409 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 EPHB3P54753 998 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 TPM4P67936 248 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 APBA1Q02410 837 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 PLD1Q13393 1074 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 CBX2Q14781 532 aaPredicted RBP13.75□□□□□ -0.21
SMPD1-202ENST00000526280 ZNF394Q53GI3 561 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 GJB7Q6PEY0 223 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 VSTM1Q6UX27 236 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 PAQR9Q6ZVX9 377 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 C12orf29Q8N999 325 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 SLC4A11Q8NBS3 891 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 TMEM176AQ96HP8 235 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 CEP72Q9P209 647 aa13.75□□□□□ -0.21
SMPD1-202ENST00000526280 GOLGA6L19H0YKK7 550 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 CLDN5O00501 218 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 IL9P15248 144 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 PTPN2P17706 415 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 ATF6P18850 670 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 PTPRDP23468 1912 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 MFAP3P55082 362 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 RPL10AP62906 217 aaKnown RBP13.74□□□□□ -0.21
SMPD1-202ENST00000526280 UBXN1Q04323 297 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 TJAP1Q5JTD0 557 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 TMEM270Q6UE05 265 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 GRASPQ7Z6J2 395 aaPredicted RBP13.74□□□□□ -0.21
SMPD1-202ENST00000526280 FUKQ8N0W3 1084 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 ELMOD1Q8N336 334 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 ZNF512Q96ME7 567 aaPredicted RBP13.74□□□□□ -0.21
SMPD1-202ENST00000526280 HEXIM2Q96MH2 286 aaKnown RBP13.74□□□□□ -0.21
SMPD1-202ENST00000526280 ZNF518BQ9C0D4 1074 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 WDR6Q9NNW5 1121 aaKnown RBP13.74□□□□□ -0.21
SMPD1-202ENST00000526280 PLCB1Q9NQ66 1216 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 FAM49BQ9NUQ9 324 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 HCFC1R1Q9NWW0 138 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 DNMT3BQ9UBC3 853 aaKnown RBP13.74□□□□□ -0.21
SMPD1-202ENST00000526280 CNTN6Q9UQ52 1028 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 ASB3Q9Y575 518 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 PCDHB4Q9Y5E5 795 aa13.74□□□□□ -0.21
SMPD1-202ENST00000526280 ATP8B3O60423 1300 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
SMPD1-202ENST00000526280 CCDC130P13994 396 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 GRIK1P39086 918 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 GPR15P49685 360 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 DDR2Q16832 855 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 KLHDC7AQ5VTJ3 777 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 DNAJB7Q7Z6W7 309 aaPredicted RBP13.73□□□□□ -0.21
SMPD1-202ENST00000526280 FAM35AQ86V20 835 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 SLC2A14Q8TDB8 520 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 GIPC2Q8TF65 315 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 PSMG2Q969U7 264 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 CYFIP2Q96F07 1278 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 NAP1L5Q96NT1 182 aaPredicted RBP13.73□□□□□ -0.21
SMPD1-202ENST00000526280 ERGIC2Q96RQ1 377 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 HNRNPABQ99729 332 aaKnown RBP13.73□□□□□ -0.21
SMPD1-202ENST00000526280 CORO1BQ9BR76 489 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 MED10Q9BTT4 135 aa13.73□□□□□ -0.21
SMPD1-202ENST00000526280 LSM14BQ9BX40 385 aaKnown RBP13.73□□□□□ -0.21
SMPD1-202ENST00000526280 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
SMPD1-202ENST00000526280 AVENQ9NQS1 362 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms