RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 RRP7AQ9Y3A4 280 aaKnown RBP3.41□□□□□ -1.86
TRAPPC4-207ENST00000526141 PAXBP1Q9Y5B6 917 aa3.41□□□□□ -1.86
TRAPPC4-207ENST00000526141 SLC30A1Q9Y6M5 507 aa3.41□□□□□ -1.86
TRAPPC4-207ENST00000526141 FAM234BA2RU67 622 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TRIM43BA6NCK2 446 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TRIM64A6NGJ6 449 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRAMEF25A6NGN4 478 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TRIM64BA6NI03 449 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 CLGNO14967 610 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 APOL3O95236 402 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 SCGB1D1O95968 90 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 A1BGP04217 495 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 APOA4P06727 396 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ITGA2BP08514 1039 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 C1SP09871 688 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 GSPT1P15170 499 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 PTPN1P18031 435 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 CR2P20023 1033 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 LMO1P25800 156 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ACRV1P26436 265 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCR5P51681 352 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 EPHA5P54756 1037 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 HERVK_113P62684 666 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 CHRNDQ07001 517 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 PPARAQ07869 468 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ADCY2Q08462 1091 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 HNRNPA0Q13151 305 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 SCARB2Q14108 478 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 SMC1AQ14683 1233 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 MYBPC3Q14896 1274 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 RAB30Q15771 203 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TSTQ16762 297 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TTC31Q49AM3 519 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCDC178Q5BJE1 867 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZMAT1Q5H9K5 638 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 GJC2Q5T442 439 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ARL6IP4Q66PJ3 421 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 MAMDC4Q6UXC1 1216 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 Q6ZSN1 163 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 KCTD1Q719H9 257 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 B4GALNT4Q76KP1 1039 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 KANSL1Q7Z3B3 1105 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 KDELC2Q7Z4H8 507 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 LDLRAD3Q86YD5 345 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 GATAD2AQ86YP4 633 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 RPAP2Q8IXW5 612 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ARL10Q8N8L6 244 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 IPO4Q8TEX9 1081 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 STYXQ8WUJ0 223 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 CACTINQ8WUQ7 758 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ASB15Q8WXK1 588 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ST8SIA4Q92187 359 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 SECISBP2LQ93073 1101 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 RILPL2Q969X0 211 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZUFSPQ96AP4 578 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 VOPP1Q96AW1 172 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TRIM43Q96BQ3 446 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 SDCCAG3Q96C92 435 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 FOXRED1Q96CU9 486 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 HIC2Q96JB3 615 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 MRGPRX1Q96LB2 322 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TUBGCP5Q96RT8 1024 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 PAIP1Q9H074 479 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 MSL2Q9HCI7 577 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 KCND1Q9NSA2 647 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ABCF3Q9NUQ8 709 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 PIH1D1Q9NWS0 290 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 CEP72Q9P209 647 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ARHGAP20Q9P2F6 1191 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 IGSF9Q9P2J2 1179 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ASH2LQ9UBL3 628 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 FEZ2Q9UHY8 353 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 HERC5Q9UII4 1024 aaKnown RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZHX1Q9UKY1 873 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 TMCC3Q9ULS5 477 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 ASB1Q9Y576 335 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 KAT6BQ8WYB5 2073 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 PASKQ96RG2 1323 aa3.4□□□□□ -1.87
TRAPPC4-207ENST00000526141 HMX3A6NHT5 357 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 FAM90A27PA6NNH2 459 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 C19orf81C9J6K1 198 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 H0Y858 1186 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 CUTAO60888 179 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 RAMP2O60895 175 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PTP4A3O75365 173 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 TNFRSF6BO95407 300 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 HSPA4LO95757 839 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRLP01236 227 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 MT-ND5P03915 603 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ENO2P09104 434 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 FTH1P19P0C7X4 201 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 RARBP10826 455 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 MTHFD1P11586 935 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ATP6V1B1P15313 513 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 IL11P20809 199 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ACTN2P35609 894 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 RPS19P39019 145 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 GPR15P49685 360 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ARFIP2P53365 341 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ACTR2P61160 394 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms