RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ZNF560Q96MR9 790 aa18.47■□□□□ 0.55
CCS-204ENST00000526066 IMPG2Q9BZV3 1241 aa18.47■□□□□ 0.55
CCS-204ENST00000526066 XPO4Q9C0E2 1151 aaKnown RBP18.47■□□□□ 0.55
CCS-204ENST00000526066 XYLT2Q9H1B5 865 aa18.47■□□□□ 0.55
CCS-204ENST00000526066 GRPEL1Q9HAV7 217 aa18.47■□□□□ 0.55
CCS-204ENST00000526066 GCNT4Q9P109 453 aa18.47■□□□□ 0.55
CCS-204ENST00000526066 FBXO4Q9UKT5 387 aa18.47■□□□□ 0.55
CCS-204ENST00000526066 WDR87Q6ZQQ6 2873 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 NCAM2O15394 837 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 CCL16O15467 120 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 AP5Z1O43299 807 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 KIF4AO95239 1232 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 KRT19P08727 400 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 CLCNKBP51801 687 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 RSPO2Q6UXX9 243 aaPredicted RBP18.46■□□□□ 0.55
CCS-204ENST00000526066 GPR161Q8N6U8 529 aaKnown RBP18.46■□□□□ 0.55
CCS-204ENST00000526066 CCDC150Q8NCX0 1101 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 SLC7A14Q8TBB6 771 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 SEMA4DQ92854 862 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 HPDLQ96IR7 371 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 FAXDC2Q96IV6 333 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 OSBPL6Q9BZF3 934 aa18.46■□□□□ 0.55
CCS-204ENST00000526066 MED19A0JLT2 244 aaPredicted RBP18.45■□□□□ 0.54
CCS-204ENST00000526066 PPEF2O14830 753 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 TEX33O43247 280 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 PON1P27169 355 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 AARSP49588 968 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCS-204ENST00000526066 TAF6P49848 677 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 MYL6P60660 151 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 NTHL1P78549 312 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 KCNMA1Q12791 1236 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 MYO1EQ12965 1108 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 PABPC1LQ4VXU2 614 aaKnown RBP18.45■□□□□ 0.54
CCS-204ENST00000526066 SLC44A4Q53GD3 710 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 SCARA3Q6AZY7 606 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 TMEM130Q8N3G9 435 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 CLSTN3Q9BQT9 956 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 PAAF1Q9BRP4 392 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 TRIM5Q9C035 493 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 INTS2Q9H0H0 1204 aaKnown RBP18.45■□□□□ 0.54
CCS-204ENST00000526066 SIK3Q9Y2K2 1263 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 PCDHGA2Q9Y5H1 932 aa18.45■□□□□ 0.54
CCS-204ENST00000526066 OTOGLQ3ZCN5 2332 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 CACNA1IQ9P0X4 2223 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 FAM170BA6NMN3 283 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 LRRN2O75325 713 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 B3GAT3O94766 335 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 GLULP15104 373 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 PBX1P40424 430 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 LILRA4P59901 499 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 CSTF1Q05048 431 aaKnown RBP18.44■□□□□ 0.54
CCS-204ENST00000526066 SYCP1Q15431 976 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 ZNF699Q32M78 642 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 SV2CQ496J9 727 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 WDR44Q5JSH3 913 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 TRIM65Q6PJ69 517 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.44■□□□□ 0.54
CCS-204ENST00000526066 DCLK2Q8N568 766 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 C3orf58Q8NDZ4 430 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 LNX1Q8TBB1 728 aaPredicted RBP18.44■□□□□ 0.54
CCS-204ENST00000526066 NELL2Q99435 816 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 KXD1Q9BQD3 176 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 CRACR2AQ9BSW2 395 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 RPP25Q9BUL9 199 aaKnown RBP18.44■□□□□ 0.54
CCS-204ENST00000526066 PLCB1Q9NQ66 1216 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 GDAP2Q9NXN4 497 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 CACNG4Q9UBN1 327 aa18.44■□□□□ 0.54
CCS-204ENST00000526066 MRPS17Q9Y2R5 130 aaKnown RBP18.44■□□□□ 0.54
CCS-204ENST00000526066 TRAPPC3O43617 180 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 POU2F2P09086 479 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 SLC9A1P19634 815 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 OR1D2P34982 312 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 NOP14P78316 857 aaKnown RBP18.43■□□□□ 0.54
CCS-204ENST00000526066 ZNF667Q5HYK9 610 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 VARS2Q5ST30 1063 aaKnown RBP18.43■□□□□ 0.54
CCS-204ENST00000526066 CD300LGQ6UXG3 332 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 RTL10Q7L3V2 364 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 MRFAP1L1Q96HT8 127 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 NT5C1BQ96P26 610 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 MRPS23Q9Y3D9 190 aaKnown RBP18.43■□□□□ 0.54
CCS-204ENST00000526066 DAAM1Q9Y4D1 1078 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 PATJQ8NI35 1801 aa18.43■□□□□ 0.54
CCS-204ENST00000526066 DOCK6Q96HP0 2047 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 KPNA7A9QM74 516 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 P4HA1P13674 534 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 ZNF75DP51815 510 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 RAB33AQ14088 237 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 RSPO4Q2I0M5 234 aaPredicted RBP18.42■□□□□ 0.54
CCS-204ENST00000526066 SMYD5Q6GMV2 418 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 DPY19L2P1Q6NXN4 242 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 TPRG1Q6ZUI0 275 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 SUMF1Q8NBK3 374 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 ITFG1Q8TB96 612 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 FAM81BQ96LP2 452 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 PI4K2AQ9BTU6 479 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 DDX23Q9BUQ8 820 aaKnown RBP18.42■□□□□ 0.54
CCS-204ENST00000526066 LSM14BQ9BX40 385 aaKnown RBP18.42■□□□□ 0.54
CCS-204ENST00000526066 APOBEC3GQ9HC16 384 aaKnown RBP18.42■□□□□ 0.54
CCS-204ENST00000526066 LTB4R2Q9NPC1 389 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms